TY - COMP
AU - Akar, Nora Abi
AU - Biddiscombe, John
AU - Cumming, Benjamin
AU - Kabic, Marko
AU - Karakasis, Vasileios
AU - Klijn, Wouter
AU - Küsters, Anne
AU - Peyser, Alexander
AU - Yates, Stuart
AU - Hater, Thorsten
AU - Huisman, Brent
AU - Hagen, Espen
AU - Schepper, Robin De
AU - Linssen, Charl
AU - Stoppels, Harmen
AU - Schmitt, Sebastian
AU - Huber, Felix
AU - Engelen, Max
AU - Bösch, Fabian
AU - Luboeinski, Jannik
AU - Frasch, Simon
AU - Drescher, Lukas
AU - Landsmeer, Lennart
TI - Arbor Library (v0.9.0); 0.9.0
M1 - FZJ-2023-03030
PY - 2023
AB - After much more delay than anticipated, we are very happy to present a new Arbor release. Nearly 8 months of work is in it, much of which focussed on speed, optimisation, fixes and build system changes. This release includes Python 3.12 wheels as probably one of the first packages on PyPI.Major new features:(1) External Connectivity: Arbor can now interface with other simulators or processes through MPI. Contexts now accept a second MPI communicator and Recipes can implement a external_connections_on method to specify how simulations might be interacting. See documentation for more. (2) Arbor now supports checkpointing and resume from a previously stored checkpoint. Useful when a certain point in time needs to be explored in multiple directions, when you want to rewind to a previous state, etc. See documentation for more.(3) More painted parameters are now scalable through iexpr : temperature, capacitance, resistivity, membrane potential and the following ionic parameters: internal and external concentration, diffusivity, and reversal potential. See documentation.(4) A set of ANN activation functions for NMODL have been added: sigmoid(x) , relu(x) and tanh(x) . Control volume area is exposed through NMODL.(5) A revamped backend for ARM CPU's that support Scalable Vector Extension (SVE). Arbor and modcc are now fully compatible, so users who have access to A64FX-based HPC can take full advantage of that hardware.
KW - neuroscience (Other)
KW - computational neuroscience (Other)
KW - morpholically detailed simulator (Other)
LB - PUB:(DE-HGF)33
DO - DOI:10.5281/ZENODO.8233847
UR - https://juser.fz-juelich.de/record/1010228
ER -