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@INPROCEEDINGS{Wagner:1019166,
author = {Wagner, Adina Svenja and Dukart, Jürgen and Patil,
Kaustubh},
title = {{O}pen research software infrastructure in
{N}euro-{M}edicine},
reportid = {FZJ-2023-05212},
year = {2023},
abstract = {A virtual talk given at the ZI Mannheim Open Science
Symposium on open source software tools in the INM-7 of the
research center Jülich, and plans for a recent
collaborative project combing them. Abstract: The
Institute of Neuroscience and Medicine: Brain and Behavior
(INM-7) at the research center Jülich combines clinical
science with open source software development and open
science. This talk will highlight central open source
software projects of our institute, and their application in
larger projects. As one of its developers, I will introduce
the data management software DataLad (www.datalad.org) and
some of its applications - from data management in consortia
to reproducible and privacy-aware data analysis at scale. In
addition, I will outline a recently established
collaborative platform for digital medicine in North Rhine
Westphalia, the ABCD-JU project. Building on our institute's
open source projects for data management, mobile health
applications and machine-learning (juaml.github.io/julearn),
it aims to establish an integrated, user-friendly, and FAIR
infrastructure for digital biomarker collection, storage,
and exchange for clinical scientists. Beyond an overview of
our tools and projects, this talk aims to spark discussions
around synergies and interoperability with projects at the
ZI.},
month = {Nov},
date = {2023-11-21},
organization = {ZI Mannheim Open Science Symposium,
virtual (Germany), 21 Nov 2023},
subtyp = {Invited},
keywords = {Open Science (Other) / Open Source Software (Other) /
Research Software (Other) / Research Software Engineering
(Other) / Data Management (Other) / Clinical data
acquisition (Other) / Patient data (Other)},
cin = {INM-7},
cid = {I:(DE-Juel1)INM-7-20090406},
pnm = {5254 - Neuroscientific Data Analytics and AI (POF4-525)},
pid = {G:(DE-HGF)POF4-5254},
typ = {PUB:(DE-HGF)31},
doi = {10.5281/ZENODO.10149348},
url = {https://juser.fz-juelich.de/record/1019166},
}