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@ARTICLE{Wulan:1030924,
author = {Wulan, Naren and An, Lijun and Zhang, Chen and Kong, Ru and
Chen, Pansheng and Bzdok, Danilo and Eickhoff, Simon B. and
Holmes, Avram J. and Yeo, B. T. Thomas},
title = {{T}ranslating phenotypic prediction models from big to
small anatomical {MRI} data using meta-matching},
journal = {Imaging neuroscience},
volume = {2},
issn = {2837-6056},
address = {Cambridge, MA},
publisher = {MIT Press},
reportid = {FZJ-2024-05517},
pages = {1 - 21},
year = {2024},
abstract = {Individualized phenotypic prediction based on structural
magnetic resonance imaging (MRI) is an important goal in
neuroscience. Prediction performance increases with larger
samples, but small-scale datasets with fewer than 200
participants are often unavoidable. We have previously
proposed a “meta-matching” framework to translate models
trained from large datasets to improve the prediction of new
unseen phenotypes in small collection efforts. Meta-matching
exploits correlations between phenotypes, yielding large
improvement over classical machine learning when applied to
prediction models using resting-state functional
connectivity as input features. Here, we adapt the two best
performing meta-matching variants (“meta-matching
finetune” and “meta-matching stacking”) from our
previous study to work with T1-weighted MRI data by changing
the base neural network architecture to a 3D convolution
neural network. We compare the two meta-matching variants
with elastic net and classical transfer learning using the
UK Biobank (N = 36,461), the Human Connectome Project Young
Adults (HCP-YA) dataset (N = 1,017), and the HCP-Aging
dataset (N = 656). We find that meta-matching outperforms
elastic net and classical transfer learning by a large
margin, both when translating models within the same dataset
and when translating models across datasets with different
MRI scanners, acquisition protocols, and demographics. For
example, when translating a UK Biobank model to 100 HCP-YA
participants, meta-matching finetune yielded a $136\%$
improvement in variance explained over transfer learning,
with an average absolute gain of $2.6\%$ (minimum =
$–0.9\%,$ maximum = $17.6\%)$ across 35 phenotypes.
Overall, our results highlight the versatility of the
meta-matching framework.},
cin = {INM-7},
ddc = {050},
cid = {I:(DE-Juel1)INM-7-20090406},
pnm = {5254 - Neuroscientific Data Analytics and AI (POF4-525) /
5252 - Brain Dysfunction and Plasticity (POF4-525)},
pid = {G:(DE-HGF)POF4-5254 / G:(DE-HGF)POF4-5252},
typ = {PUB:(DE-HGF)16},
pubmed = {40800257},
UT = {WOS:001531565300003},
doi = {10.1162/imag_a_00251},
url = {https://juser.fz-juelich.de/record/1030924},
}