001033608 001__ 1033608
001033608 005__ 20241213210708.0
001033608 037__ $$aFZJ-2024-06488
001033608 041__ $$aEnglish
001033608 1001_ $$0P:(DE-Juel1)165746$$aDickscheid, Timo$$b0$$ufzj
001033608 1112_ $$aINM Retreat 2024$$cJülich$$d2024-11-19 - 2024-11-19$$wGermany
001033608 245__ $$aTutorial: The siibra toolsuit for accessing the EBRAINS human brain atlas
001033608 260__ $$c2024
001033608 3367_ $$2DRIVER$$alecture
001033608 3367_ $$031$$2EndNote$$aGeneric
001033608 3367_ $$2BibTeX$$aMISC
001033608 3367_ $$0PUB:(DE-HGF)17$$2PUB:(DE-HGF)$$aLecture$$blecture$$mlecture$$s1734073422_7859$$xOutreach
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001033608 520__ $$aiibra is a software tool suite implementing an openly accessible brain atlas framework which connects multimodal datasets from different resources to anatomical structures in reference spaces at different spatial scales. The tool suite is designed to address both interactive exploration through an interactive 3D web viewer (siibra-explorer) as well as integration into data analysis and simulation workflows with a comprehensive Python library (siibra-python). In this session, we first introduce the multidimensional concept of the atlas framework and explore some key features such as the BigBrain interactively. We then turn to concrete programming tutorials in Python. These include fetching brain region maps, accessing the BigBrain dataset, and extracting multimodal regional features such as cortical thicknesses, cell and neurotransmitter densities, gene expressions and connectivity data. We will finish with some concrete data analysis examples.
001033608 536__ $$0G:(DE-HGF)POF4-5254$$a5254 - Neuroscientific Data Analytics and AI (POF4-525)$$cPOF4-525$$fPOF IV$$x0
001033608 7001_ $$0P:(DE-Juel1)196766$$aLothmann, Kimberley$$b1$$ufzj
001033608 7001_ $$0P:(DE-Juel1)196084$$aSimsek, Ahmet Nihat$$b2$$ufzj
001033608 7001_ $$0P:(DE-Juel1)172713$$aGui, Xiaoyun$$b3$$ufzj
001033608 909CO $$ooai:juser.fz-juelich.de:1033608$$pVDB
001033608 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)165746$$aForschungszentrum Jülich$$b0$$kFZJ
001033608 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)196766$$aForschungszentrum Jülich$$b1$$kFZJ
001033608 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)196084$$aForschungszentrum Jülich$$b2$$kFZJ
001033608 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)172713$$aForschungszentrum Jülich$$b3$$kFZJ
001033608 9131_ $$0G:(DE-HGF)POF4-525$$1G:(DE-HGF)POF4-520$$2G:(DE-HGF)POF4-500$$3G:(DE-HGF)POF4$$4G:(DE-HGF)POF$$9G:(DE-HGF)POF4-5254$$aDE-HGF$$bKey Technologies$$lNatural, Artificial and Cognitive Information Processing$$vDecoding Brain Organization and Dysfunction$$x0
001033608 9141_ $$y2024
001033608 920__ $$lyes
001033608 9201_ $$0I:(DE-Juel1)INM-1-20090406$$kINM-1$$lStrukturelle und funktionelle Organisation des Gehirns$$x0
001033608 980__ $$alecture
001033608 980__ $$aVDB
001033608 980__ $$aI:(DE-Juel1)INM-1-20090406
001033608 980__ $$aUNRESTRICTED