000135273 001__ 135273 000135273 005__ 20210129211824.0 000135273 0247_ $$2doi$$a10.3389/fmicb.2013.00022 000135273 0247_ $$2WOS$$aWOS:000330963300002 000135273 0247_ $$2Handle$$a2128/5222 000135273 0247_ $$2altmetric$$aaltmetric:1239354 000135273 0247_ $$2pmid$$apmid:23420031 000135273 037__ $$aFZJ-2013-03227 000135273 082__ $$a570 000135273 1001_ $$0P:(DE-HGF)0$$aOllivier, Julien$$b0$$eCorresponding author 000135273 245__ $$aEffects of repeated application of sulfadiazine-contaminated pig manure on the abundance and diversity of ammonia and nitrite oxidizers in the root-rhizosphere complex of pasture plants under field conditions 000135273 260__ $$aLausanne$$bFrontiers Media$$c2013 000135273 3367_ $$0PUB:(DE-HGF)16$$2PUB:(DE-HGF)$$aJournal Article$$bjournal$$mjournal$$s135273 000135273 3367_ $$2DataCite$$aOutput Types/Journal article 000135273 3367_ $$00$$2EndNote$$aJournal Article 000135273 3367_ $$2BibTeX$$aARTICLE 000135273 3367_ $$2ORCID$$aJOURNAL_ARTICLE 000135273 3367_ $$2DRIVER$$aarticle 000135273 500__ $$3POF3_Assignment on 2016-02-29 000135273 520__ $$aIn a field experiment, the impact of repeated application of the antibiotic sulfadiazine (SDZ)-contaminated pig manure was assessed on functional microbial communities involved in ammonia and nitrite oxidation in the root-rhizosphere complexes (RRCs) of diverse plants composing a pasture. We surveyed the abundance of ammonia-oxidizing archaea (AOA) and bacteria (AOB) as well as Nitrobacter- and Nitrospira-like nitrite-oxidizing bacteria (NOB) by quantitative PCR (qPCR), and the diversity of amoA AOA and Nitrobacter-like nxrA amplicons using a cloning-sequencing approach. Whereas the first SDZ-contaminated manure application caused only slight effects on the investigated microbial communities and did not change the diversity and abundance pattern significantly, the second application of SDZ-contaminated manure induced an up to 15-fold increased ratio of AOA:AOB and a reduction of nrxA genes. The diversity of AOA amoA increased after the second application of SDZ-contaminated manure compared to the control treatment whereas a clear reduction of nrxA OTUs was visible in the same samples. The results indicate that the application of SDZ may principally affect nitrite oxidation by NOB and alternative pathways like nitrite reduction might be favored under these conditions. 000135273 536__ $$0G:(DE-HGF)POF2-245$$a245 - Chemicals in the Environment (POF2-245)$$cPOF2-245$$fPOF II$$x0 000135273 536__ $$0G:(GEPRIS)5446234$$aDFG 5446234, DFG FOR 566 / TP A4 - Transport of veterinary medicines from soils to groundwater (5446234)$$c5446234$$fDFG FOR 566 / TP A4$$x1 000135273 588__ $$aDataset connected to 000135273 7001_ $$0P:(DE-HGF)0$$aSchacht, Daniela$$b1 000135273 7001_ $$0P:(DE-HGF)0$$aKindler, Reimo$$b2 000135273 7001_ $$0P:(DE-Juel1)129462$$aGroeneweg, Joost$$b3$$ufzj 000135273 7001_ $$0P:(DE-HGF)0$$aEngel, Marion$$b4 000135273 7001_ $$0P:(DE-HGF)0$$aWilke, Berndt-Michael$$b5 000135273 7001_ $$0P:(DE-HGF)0$$aKleineidam, Kristina$$b6 000135273 7001_ $$0P:(DE-HGF)0$$aSchloter, Michael$$b7 000135273 773__ $$0PERI:(DE-600)2587354-4$$a10.3389/fmicb.2013.00022$$gVol. 4$$n22$$p1-14$$tFrontiers in microbiology$$v4$$x1664-302X 000135273 8564_ $$yPublishers version according to licensing conditions.$$zPublished final document. 000135273 8564_ $$uhttps://juser.fz-juelich.de/record/135273/files/FZJ-2013-03227.pdf$$yOpenAccess$$zPublished final document. 000135273 8564_ $$uhttps://juser.fz-juelich.de/record/135273/files/FZJ-2013-03227.jpg?subformat=icon-1440$$xicon-1440$$yOpenAccess 000135273 8564_ $$uhttps://juser.fz-juelich.de/record/135273/files/FZJ-2013-03227.jpg?subformat=icon-180$$xicon-180$$yOpenAccess 000135273 8564_ $$uhttps://juser.fz-juelich.de/record/135273/files/FZJ-2013-03227.jpg?subformat=icon-640$$xicon-640$$yOpenAccess 000135273 909__ $$ooai:juser.fz-juelich.de:135273$$pVDB 000135273 909CO $$ooai:juser.fz-juelich.de:135273$$pdnbdelivery$$pVDB$$pVDB:Earth_Environment$$pdriver$$popen_access$$popenaire 000135273 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)129462$$aForschungszentrum Jülich GmbH$$b3$$kFZJ 000135273 9132_ $$0G:(DE-HGF)POF3-259H$$1G:(DE-HGF)POF3-250$$2G:(DE-HGF)POF3-200$$aDE-HGF$$bMarine, Küsten- und Polare Systeme$$lTerrestrische Umwelt$$vAddenda$$x0 000135273 9131_ $$0G:(DE-HGF)POF2-245$$1G:(DE-HGF)POF2-240$$2G:(DE-HGF)POF2-200$$3G:(DE-HGF)POF2$$4G:(DE-HGF)POF$$aDE-HGF$$bErde und Umwelt$$lTerrestrische Umwelt$$vChemicals in the Environment$$x0 000135273 9141_ $$y2013 000135273 915__ $$0LIC:(DE-HGF)CCBY3$$2HGFVOC$$aCreative Commons Attribution CC BY 3.0 000135273 915__ $$0StatID:(DE-HGF)0500$$2StatID$$aDBCoverage$$bDOAJ 000135273 915__ $$0StatID:(DE-HGF)0510$$2StatID$$aOpenAccess 000135273 915__ $$0StatID:(DE-HGF)0310$$2StatID$$aDBCoverage$$bNCBI Molecular Biology Database 000135273 915__ $$0StatID:(DE-HGF)0300$$2StatID$$aDBCoverage$$bMedline 000135273 915__ $$0StatID:(DE-HGF)0040$$2StatID$$aPeer review unknown 000135273 920__ $$lyes 000135273 9201_ $$0I:(DE-Juel1)IBG-3-20101118$$kIBG-3$$lAgrosphäre$$x0 000135273 980__ $$ajournal 000135273 980__ $$aUNRESTRICTED 000135273 980__ $$aFullTexts 000135273 980__ $$aI:(DE-Juel1)IBG-3-20101118 000135273 980__ $$aVDB 000135273 9801_ $$aFullTexts