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@ARTICLE{Vlachos:141627,
author = {Vlachos, Ioannis and Zaytsev, Yury and Spreizer, Sebastian
and Aertsen, Ad and Kumar, Arvind},
title = {{N}eural system prediction and identification challenge},
journal = {Frontiers in neuroinformatics},
volume = {7},
number = {43},
issn = {1662-5196},
address = {Lausanne},
publisher = {Frontiers Research Foundation},
reportid = {FZJ-2013-06792},
pages = {1-10},
year = {2013},
abstract = {Can we infer the function of a biological neural network
(BNN) if we know the connectivity and activity of all its
constituent neurons? This question is at the core of
neuroscience and, accordingly, various methods have been
developed to record the activity and connectivity of as many
neurons as possible. Surprisingly, there is no theoretical
or computational demonstration that neuronal activity and
connectivity are indeed sufficient to infer the function of
a BNN. Therefore, we pose the Neural Systems Identification
and Prediction Challenge (nuSPIC). We provide the
connectivity and activity of all neurons and invite
participants (1) to infer the functions implemented
(hard-wired) in spiking neural networks (SNNs) by
stimulating and recording the activity of neurons and, (2)
to implement predefined mathematical/biological functions
using SNNs. The nuSPICs can be accessed via a web-interface
to the NEST simulator and the user is not required to know
any specific programming language. Furthermore, the nuSPICs
can be used as a teaching tool. Finally, nuSPICs use the
crowd-sourcing model to address scientific issues. With this
computational approach we aim to identify which functions
can be inferred by systematic recordings of neuronal
activity and connectivity. In addition, nuSPICs will help
the design and application of new experimental paradigms
based on the structure of the SNN and the presumed function
which is to be discovered.},
cin = {JSC / JARA-HPC},
ddc = {610},
cid = {I:(DE-Juel1)JSC-20090406 / $I:(DE-82)080012_20140620$},
pnm = {411 - Computational Science and Mathematical Methods
(POF2-411) / HASB - Helmholtz Alliance on Systems Biology
(HGF-SystemsBiology) / SMHB - Supercomputing and Modelling
for the Human Brain (HGF-SMHB-2013-2017) / SLNS - SimLab
Neuroscience (Helmholtz-SLNS)},
pid = {G:(DE-HGF)POF2-411 / G:(DE-Juel1)HGF-SystemsBiology /
G:(DE-Juel1)HGF-SMHB-2013-2017 / G:(DE-Juel1)Helmholtz-SLNS},
typ = {PUB:(DE-HGF)16},
UT = {WOS:000209207300040},
pubmed = {pmid:24399966},
doi = {10.3389/fninf.2013.00043},
url = {https://juser.fz-juelich.de/record/141627},
}