% IMPORTANT: The following is UTF-8 encoded. This means that in the presence
% of non-ASCII characters, it will not work with BibTeX 0.99 or older.
% Instead, you should use an up-to-date BibTeX implementation like “bibtex8” or
% “biber”.
@ARTICLE{Walsh:186000,
author = {Walsh, I. and Giollo, M. and Di Domenico, T. and Ferrari,
C. and Zimmermann, O. and Tosatto, S. C. E.},
title = {{C}omprehensive large-scale assessment of intrinsic protein
disorder},
journal = {Bioinformatics},
volume = {31},
number = {2},
issn = {0266-7061},
address = {Oxford},
publisher = {Oxford Univ. Press},
reportid = {FZJ-2015-00109},
pages = {201-208},
year = {2015},
abstract = {Motivation: Intrinsically disordered regions are key for
the function of numerous proteins. Due to the difficulties
in experimental disorder characterization, many
computational predictors have been developed with various
disorder flavors. Their performance is generally measured on
small sets mainly from experimentally solved structures,
e.g. Protein Data Bank (PDB) chains. MobiDB has only
recently started to collect disorder annotations from
multiple experimental structures.Results: MobiDB annotates
disorder for UniProt sequences, allowing us to conduct the
first large-scale assessment of fast disorder predictors on
25 833 different sequences with X-ray crystallographic
structures. In addition to a comprehensive ranking of
predictors, this analysis produced the following interesting
observations. (i) The predictors cluster according to their
disorder definition, with a consensus giving more
confidence. (ii) Previous assessments appear over-reliant on
data annotated at the PDB chain level and performance is
lower on entire UniProt sequences. (iii) Long disordered
regions are harder to predict. (iv) Depending on the
structural and functional types of the proteins, differences
in prediction performance of up to $10\%$ are observed.},
cin = {JSC},
ddc = {004},
cid = {I:(DE-Juel1)JSC-20090406},
pnm = {511 - Computational Science and Mathematical Methods
(POF3-511)},
pid = {G:(DE-HGF)POF3-511},
typ = {PUB:(DE-HGF)16},
UT = {WOS:000347832300008},
pubmed = {pmid:25246432},
doi = {10.1093/bioinformatics/btu625},
url = {https://juser.fz-juelich.de/record/186000},
}