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@ARTICLE{Usadel:22186,
author = {Usadel, B. and Schwacke, R. and Nagel, A. and Kersten, B.},
title = {{G}abi{PD} – the {GABI} {P}rimary {D}atabase integrates
plant proteomic data with gene-centric informatio},
journal = {Frontiers in plant science: FPLS},
volume = {3},
number = {154},
issn = {1664-462X},
address = {Lausanne},
publisher = {Frontiers Media},
reportid = {PreJuSER-22186},
pages = {1-6},
year = {2012},
note = {Record converted from VDB: 12.11.2012},
abstract = {GabiPD is an integrative plant "omics" database that has
been established as part of the German initiative for Genome
Analysis of the Plant Biological System (GABI). Data from
different "omics" disciplines are integrated and
interactively visualized. Proteomics is represented by data
and tools aiding studies on the identification of
post-translational modification and function of proteins.
Annotated 2D electrophoresis-gel images are offered to
inspect protein sets expressed in different tissues of
Arabidopsis thaliana and Brassica napus. From a given
protein spot, a link will direct the user to the related
GreenCard Gene entry where detailed gene-centric information
will support the functional annotation. Beside MapMan- and
GO-classification, information on conserved protein domains
and on orthologs is integrated in this GreenCard service.
Moreover, all other GabiPD data related to the gene,
including transcriptomic data, as well as gene-specific
links to external resources are provided. Researches
interested in plant protein phosphorylation will find
information on potential MAP kinase substrates identified in
different protein microarray studies integrated in GabiPD's
Phosphoproteomics page. These data can be easily compared to
experimentally identified or predicted phosphorylation sites
in PhosPhAt via the related Gene GreenCard. This will allow
the selection of interesting candidates for further
experimental validation of their phosphorylation.},
cin = {IBG-2},
ddc = {570},
cid = {I:(DE-Juel1)IBG-2-20101118},
pnm = {Terrestrische Umwelt},
pid = {G:(DE-Juel1)FUEK407},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:22787465},
pmc = {pmc:PMC3391694},
UT = {WOS:000208837900151},
doi = {10.3389/fpls.2012.00154},
url = {https://juser.fz-juelich.de/record/22186},
}