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@ARTICLE{Wildberg:279299,
author = {Wildberg, André and Della Corte, Dennis and Schröder,
Gunnar},
title = {{C}oupling an {E}nsemble of {H}omologues {I}mproves
{R}efinement of {P}rotein {H}omology {M}odels},
journal = {Journal of chemical theory and computation},
volume = {11},
number = {12},
issn = {1549-9626},
address = {Washington, DC},
publisher = {American Chemical Society (ACS)},
reportid = {FZJ-2015-07314},
pages = {5578 - 5582},
year = {2015},
abstract = {Atomic models of proteins built by homology modeling or
from low-resolution experimental data may contain
considerable local errors. The refinement success of
molecular dynamics simulations is usually limited by both
force field accuracy and by the substantial width of the
conformational distribution at physiological temperatures.
We propose a method to overcome both these problems by
coupling homologous replicas during a molecular dynamics
simulation, which narrows the conformational distribution,
and smoothens and even improves the energy landscape by
adding evolutionary information.},
cin = {ICS-6 / JARA-HPC},
ddc = {540},
cid = {I:(DE-Juel1)ICS-6-20110106 / $I:(DE-82)080012_20140620$},
pnm = {551 - Functional Macromolecules and Complexes (POF3-551) /
Critical Assessment of Protein Structure Prediction 12
$(jics66_20160501)$},
pid = {G:(DE-HGF)POF3-551 / $G:(DE-Juel1)jics66_20160501$},
typ = {PUB:(DE-HGF)16},
UT = {WOS:000366223400003},
pubmed = {pmid:26642980},
doi = {10.1021/acs.jctc.5b00942},
url = {https://juser.fz-juelich.de/record/279299},
}