Home > Publications database > Improvement of Oligonucleotide Probe Design Criteria for Functional Gene Microarrays in Environmental applications > print |
001 | 50473 | ||
005 | 20200423204316.0 | ||
024 | 7 | _ | |a pmid:16461729 |2 pmid |
024 | 7 | _ | |a pmc:PMC1392891 |2 pmc |
024 | 7 | _ | |a 10.1128/AEM.72.2.1688-1691.2006 |2 DOI |
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037 | _ | _ | |a PreJuSER-50473 |
041 | _ | _ | |a eng |
082 | _ | _ | |a 570 |
084 | _ | _ | |2 WoS |a Biotechnology & Applied Microbiology |
084 | _ | _ | |2 WoS |a Microbiology |
100 | 1 | _ | |a Liebich, J. |b 0 |u FZJ |0 P:(DE-Juel1)VDB940 |
245 | _ | _ | |a Improvement of Oligonucleotide Probe Design Criteria for Functional Gene Microarrays in Environmental applications |
260 | _ | _ | |a Washington, DC [u.a.] |b Soc. |c 2006 |
300 | _ | _ | |a 1688 - 1691 |
336 | 7 | _ | |a Journal Article |0 PUB:(DE-HGF)16 |2 PUB:(DE-HGF) |
336 | 7 | _ | |a Output Types/Journal article |2 DataCite |
336 | 7 | _ | |a Journal Article |0 0 |2 EndNote |
336 | 7 | _ | |a ARTICLE |2 BibTeX |
336 | 7 | _ | |a JOURNAL_ARTICLE |2 ORCID |
336 | 7 | _ | |a article |2 DRIVER |
440 | _ | 0 | |a Applied and Environmental Microbiology |x 0099-2240 |0 8561 |y 2 |v 72 |
500 | _ | _ | |a Record converted from VDB: 12.11.2012 |
520 | _ | _ | |a To optimize oligonucleotide probe design criteria, PCR products with different similarities to probes were hybridized to a functional gene microarray designed to detect homologous genes from different organisms. In contrast to more restrictive probe designs based on a single criterion, simultaneous consideration of the percent similarity (< or =90%), the length of identical sequence stretches (< or =20 bases), and the binding free energy (> or =-35 kcal mol(-1)) was found to be predictive of probe specificity. |
536 | _ | _ | |a Terrestrische Umwelt |c P24 |2 G:(DE-HGF) |0 G:(DE-Juel1)FUEK407 |x 0 |
588 | _ | _ | |a Dataset connected to Web of Science, Pubmed |
650 | _ | 2 | |2 MeSH |a Base Sequence |
650 | _ | 2 | |2 MeSH |a Drug Design |
650 | _ | 2 | |2 MeSH |a Environmental Microbiology |
650 | _ | 2 | |2 MeSH |a Nucleic Acid Hybridization |
650 | _ | 2 | |2 MeSH |a Oligonucleotide Array Sequence Analysis: methods |
650 | _ | 2 | |2 MeSH |a Oligonucleotide Array Sequence Analysis: statistics & numerical data |
650 | _ | 2 | |2 MeSH |a Oligonucleotide Probes: chemistry |
650 | _ | 2 | |2 MeSH |a Oligonucleotide Probes: genetics |
650 | _ | 2 | |2 MeSH |a Polymerase Chain Reaction |
650 | _ | 2 | |2 MeSH |a Thermodynamics |
650 | _ | 7 | |0 0 |2 NLM Chemicals |a Oligonucleotide Probes |
650 | _ | 7 | |a J |2 WoSType |
700 | 1 | _ | |a Schadt, C. W. |b 1 |0 P:(DE-HGF)0 |
700 | 1 | _ | |a Chong, S. C. |b 2 |0 P:(DE-HGF)0 |
700 | 1 | _ | |a He, Z. |b 3 |0 P:(DE-HGF)0 |
700 | 1 | _ | |a Rhee, S.-K. |b 4 |0 P:(DE-HGF)0 |
700 | 1 | _ | |a Zhou, J.-H. |b 5 |0 P:(DE-HGF)0 |
773 | _ | _ | |a 10.1128/AEM.72.2.1688-1691.2006 |g Vol. 72, p. 1688 - 1691 |p 1688 - 1691 |q 72<1688 - 1691 |0 PERI:(DE-600)1478346-0 |t Applied and environmental microbiology |v 72 |y 2006 |x 0099-2240 |
856 | 7 | _ | |2 Pubmed Central |u http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1392891 |
856 | 4 | _ | |u https://juser.fz-juelich.de/record/50473/files/78793.pdf |y OpenAccess |
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914 | 1 | _ | |y 2006 |
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