Home > Publications database > Full length Vpu from HIV-1: Combining molecular dynamics simulations with NMR spectroscopy > print |
001 | 55021 | ||
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041 | _ | _ | |a eng |
082 | _ | _ | |a 570 |
084 | _ | _ | |2 WoS |a Biochemistry & Molecular Biology |
084 | _ | _ | |2 WoS |a Biophysics |
100 | 1 | _ | |a Lemaitre, V. |b 0 |0 P:(DE-HGF)0 |
245 | _ | _ | |a Full length Vpu from HIV-1: Combining molecular dynamics simulations with NMR spectroscopy |
260 | _ | _ | |a Guilderland, NY |b Adenine Press |c 2006 |
300 | _ | _ | |a 485 - 496 |
336 | 7 | _ | |a Journal Article |0 PUB:(DE-HGF)16 |2 PUB:(DE-HGF) |
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440 | _ | 0 | |a Journal of Biomolecular Structure & Dynamics |x 0739-1102 |0 16381 |v 23 |
500 | _ | _ | |a Record converted from VDB: 12.11.2012 |
520 | _ | _ | |a Based on structures made available by solution NMR, molecular models of the protein Vpu from HIV-1 were built and refined by 6 ns MD simulations in a fully hydrated lipid bilayer. Vpu is an 81 amino acid type I integral membrane protein encoded by the human immunodeficiency virus type-1 (HIV- 1) and closely related simian immunodeficiency viruses (SIVs). Its role is to amplify viral release. Upon phosphorylation, the cytoplasmic domain adopts a more compact shape with helices 2 and 3 becoming almost parallel to each other. A loss of helicity for several residues belonging to the helices adjacent to both ends of the loop region containing serines 53 and 57 is observed. A fourth helix, present in one of: the NMR-based Structures of the cytoplasmic domain and located near the C-terminus, is lost upon phosphorylation. |
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588 | _ | _ | |a Dataset connected to Web of Science |
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653 | 2 | 0 | |2 Author |a Vpu |
653 | 2 | 0 | |2 Author |a HIV-1 |
653 | 2 | 0 | |2 Author |a membrane protein |
653 | 2 | 0 | |2 Author |a molecular dynamics simulations |
653 | 2 | 0 | |2 Author |a NMR spectroscopy |
700 | 1 | _ | |a Wray, V. |b 1 |0 P:(DE-HGF)0 |
700 | 1 | _ | |a Willbold, D. |b 2 |u FZJ |0 P:(DE-Juel1)132029 |
700 | 1 | _ | |a Watts, A. |b 3 |0 P:(DE-HGF)0 |
700 | 1 | _ | |a Fischer, W. B. |b 4 |0 P:(DE-HGF)0 |
773 | _ | _ | |g Vol. 23, p. 485 - 496 |p 485 - 496 |q 23<485 - 496 |0 PERI:(DE-600)2085732-9 |t Journal of biomolecular structure & dynamics |v 23 |y 2006 |x 0739-1102 |
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914 | 1 | _ | |y 2006 |
915 | _ | _ | |0 StatID:(DE-HGF)0010 |a JCR/ISI refereed |
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