001     57335
005     20240610120538.0
024 7 _ |a 10.1103/PhysRevE.76.011804
|2 DOI
024 7 _ |a WOS:000248548900086
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024 7 _ |a 2128/9244
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037 _ _ |a PreJuSER-57335
041 _ _ |a eng
082 _ _ |a 530
084 _ _ |2 WoS
|a Physics, Fluids & Plasmas
084 _ _ |2 WoS
|a Physics, Mathematical
100 1 _ |a Yang, Y.
|b 0
|u FZJ
|0 P:(DE-Juel1)VDB37724
245 _ _ |a Free energy and extension of a semiflexible polymer in cylindrical confining geometries
260 _ _ |a College Park, Md.
|b APS
|c 2007
264 _ 1 |3 online
|2 Crossref
|b American Physical Society (APS)
|c 2007-07-19
264 _ 1 |3 print
|2 Crossref
|b American Physical Society (APS)
|c 2007-07-01
300 _ _ |a 011804
336 7 _ |a Journal Article
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440 _ 0 |a Physical Review E
|x 1539-3755
|0 4924
|v 76
500 _ _ |a Record converted from VDB: 12.11.2012
520 _ _ |a We consider a long, semiflexible polymer with persistence length P and contour length L fluctuating in a narrow cylindrical channel of diameter D. In the regime D < P < L the free energy of confinement Delta F and the length of the channel R-parallel to occupied by the polymer are given by Odijk's relations Delta F/R-parallel to=A(o)k(B)TP(-1/3)D(-2/3) and R-parallel to=L[1-alpha(o)(D/P)(2/3)], where A(o) and alpha(o) are dimensionless amplitudes. Using a simulation algorithm inspired by the pruned enriched Rosenbluth method, which yields results for very long polymers, we determine A(o) and alpha(o) and the analogous amplitudes for a channel with a rectangular cross section. For a semiflexible polymer confined to the surface of a cylinder, the corresponding amplitudes are derived with an exact analytic approach. The results are relevant for interpreting experiments on biopolymers in microchannels or microfluidic devices.
536 _ _ |a Kondensierte Materie
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542 _ _ |i 2007-07-19
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588 _ _ |a Dataset connected to Web of Science
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700 1 _ |a Burkhardt, T. W.
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700 1 _ |a Gompper, G.
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773 1 8 |a 10.1103/physreve.76.011804
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|d 2007-07-19
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|t Physical Review E
|v 76
|y 2007
|x 1539-3755
773 _ _ |a 10.1103/PhysRevE.76.011804
|g Vol. 76, p. 011804
|p 011804
|n 1
|q 76<011804
|0 PERI:(DE-600)2844562-4
|t Physical review / E
|v 76
|y 2007
|x 1539-3755
856 7 _ |u http://dx.doi.org/10.1103/PhysRevE.76.011804
856 4 _ |u https://juser.fz-juelich.de/record/57335/files/PhysRevE.76.011804.pdf
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913 1 _ |k P54
|v Kondensierte Materie
|l Kondensierte Materie
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914 1 _ |y 2007
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915 _ _ |a American Physical Society Transfer of Copyright Agreement
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920 1 _ |k IFF-2
|l Theorie der Weichen Materie und Biophysik
|d 31.12.2010
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|0 I:(DE-Juel1)VDB782
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920 1 _ |k JARA-SIM
|l Jülich-Aachen Research Alliance - Simulation Sciences
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999 C 5 |a 10.1103/PhysRevE.56.3682
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999 C 5 |1 P. Grassberger
|y 1998
|2 Crossref
|t Monte Carlo Approach to Biopolymers and Protein Folding
|o P. Grassberger Monte Carlo Approach to Biopolymers and Protein Folding 1998
999 C 5 |1 P. Grassberger
|y 2002
|2 Crossref
|t Computational Statistical Physics—From Billiards to Monte Carlo
|o P. Grassberger Computational Statistical Physics—From Billiards to Monte Carlo 2002
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