| 001 | 824919 | ||
| 005 | 20210129225144.0 | ||
| 020 | _ | _ | |a 978-3-319-50861-0 (print) |
| 020 | _ | _ | |a 978-3-319-50862-7 (electronic) |
| 024 | 7 | _ | |a 10.1007/978-3-319-50862-7_3 |2 doi |
| 024 | 7 | _ | |a 0302-9743 |2 ISSN |
| 024 | 7 | _ | |a 1611-3349 |2 ISSN |
| 024 | 7 | _ | |a altmetric:21831789 |2 altmetric |
| 037 | _ | _ | |a FZJ-2016-07420 |
| 041 | _ | _ | |a English |
| 082 | _ | _ | |a 004 |
| 100 | 1 | _ | |a Lührs, Anna |0 P:(DE-Juel1)132291 |b 0 |e Corresponding author |u fzj |
| 111 | 2 | _ | |a International Workshop on Brain-Inspired Computing |g BrainComp 2015 |c Cetraro |d 2015-07-06 - 2015-07-10 |w Italy |
| 245 | _ | _ | |a Towards Large-Scale Fiber Orientation Models of the Brain – Automation and Parallelization of a Seeded Region Growing Segmentation of High-Resolution Brain Section Images |
| 260 | _ | _ | |a Cham |c 2016 |b Springer International Publishing |
| 295 | 1 | 0 | |a Brain-Inspired Computing |
| 300 | _ | _ | |a 28 - 42 |
| 336 | 7 | _ | |a CONFERENCE_PAPER |2 ORCID |
| 336 | 7 | _ | |a Conference Paper |0 33 |2 EndNote |
| 336 | 7 | _ | |a INPROCEEDINGS |2 BibTeX |
| 336 | 7 | _ | |a conferenceObject |2 DRIVER |
| 336 | 7 | _ | |a Output Types/Conference Paper |2 DataCite |
| 336 | 7 | _ | |a Contribution to a conference proceedings |b contrib |m contrib |0 PUB:(DE-HGF)8 |s 1563262675_3032 |2 PUB:(DE-HGF) |
| 336 | 7 | _ | |a Contribution to a book |0 PUB:(DE-HGF)7 |2 PUB:(DE-HGF) |m contb |
| 490 | 0 | _ | |a Lecture Notes in Computer Science |v 10087 |
| 520 | _ | _ | |a To understand the microscopical organization of the human brain including cellular and fiber architectures, it is a necessary prerequisite to build virtual models of the brain on a sound biological basis. 3D Polarized Light Imaging (3D-PLI) provides a window to analyze the fiber architecture and the fibers’ intricate inter-connections at microscopic resolutions. Considering the complexity and the pure size of the human brain with its nearly 86 billion nerve cells, 3D-PLI is challenging with respect to data handling and analysis in the TeraByte to PetaByte ranges, and inevitably requires supercomputing facilities. Parallelization and automation of image processing steps open up new perspectives to speed up the generation of new high resolution models of the human brain to provide groundbreaking insights into the brain’s three-dimensional micro architecture. Here, we will describe the implementation and the performance of a parallelized semi-automated seeded region growing algorithm used to classify tissue and background components in up to one million 3D-PLI images acquired from an entire human brain. This algorithm represents an important element of a complex UNICORE-based analysis workflow ultimately aiming at the extraction of spatial fiber orientations from 3D-PLI measurements. |
| 536 | _ | _ | |a 511 - Computational Science and Mathematical Methods (POF3-511) |0 G:(DE-HGF)POF3-511 |c POF3-511 |f POF III |x 0 |
| 536 | _ | _ | |a 574 - Theory, modelling and simulation (POF3-574) |0 G:(DE-HGF)POF3-574 |c POF3-574 |f POF III |x 1 |
| 536 | _ | _ | |a SMHB - Supercomputing and Modelling for the Human Brain (HGF-SMHB-2013-2017) |0 G:(DE-Juel1)HGF-SMHB-2013-2017 |c HGF-SMHB-2013-2017 |f SMHB |x 2 |
| 536 | _ | _ | |a HBP - The Human Brain Project (604102) |0 G:(EU-Grant)604102 |c 604102 |f FP7-ICT-2013-FET-F |x 3 |
| 536 | _ | _ | |a SLNS - SimLab Neuroscience (Helmholtz-SLNS) |0 G:(DE-Juel1)Helmholtz-SLNS |c Helmholtz-SLNS |x 4 |
| 588 | _ | _ | |a Dataset connected to CrossRef Book Series |
| 700 | 1 | _ | |a Bücker, Oliver |0 P:(DE-Juel1)132074 |b 1 |u fzj |
| 700 | 1 | _ | |a Axer, Markus |0 P:(DE-Juel1)131632 |b 2 |u fzj |
| 773 | _ | _ | |a 10.1007/978-3-319-50862-7_3 |
| 856 | 4 | _ | |u https://juser.fz-juelich.de/record/824919/files/BrainComp2015-Luehrs.pdf |y Restricted |
| 856 | 4 | _ | |u https://juser.fz-juelich.de/record/824919/files/BrainComp2015-Luehrs.gif?subformat=icon |x icon |y Restricted |
| 856 | 4 | _ | |u https://juser.fz-juelich.de/record/824919/files/BrainComp2015-Luehrs.jpg?subformat=icon-1440 |x icon-1440 |y Restricted |
| 856 | 4 | _ | |u https://juser.fz-juelich.de/record/824919/files/BrainComp2015-Luehrs.jpg?subformat=icon-180 |x icon-180 |y Restricted |
| 856 | 4 | _ | |u https://juser.fz-juelich.de/record/824919/files/BrainComp2015-Luehrs.jpg?subformat=icon-640 |x icon-640 |y Restricted |
| 856 | 4 | _ | |u https://juser.fz-juelich.de/record/824919/files/BrainComp2015-Luehrs.pdf?subformat=pdfa |x pdfa |y Restricted |
| 909 | C | O | |o oai:juser.fz-juelich.de:824919 |p openaire |p VDB |p ec_fundedresources |
| 910 | 1 | _ | |a Forschungszentrum Jülich |0 I:(DE-588b)5008462-8 |k FZJ |b 0 |6 P:(DE-Juel1)132291 |
| 910 | 1 | _ | |a Forschungszentrum Jülich |0 I:(DE-588b)5008462-8 |k FZJ |b 1 |6 P:(DE-Juel1)132074 |
| 910 | 1 | _ | |a Forschungszentrum Jülich |0 I:(DE-588b)5008462-8 |k FZJ |b 2 |6 P:(DE-Juel1)131632 |
| 913 | 1 | _ | |a DE-HGF |b Key Technologies |1 G:(DE-HGF)POF3-510 |0 G:(DE-HGF)POF3-511 |2 G:(DE-HGF)POF3-500 |v Computational Science and Mathematical Methods |x 0 |4 G:(DE-HGF)POF |3 G:(DE-HGF)POF3 |l Supercomputing & Big Data |
| 913 | 1 | _ | |a DE-HGF |b Key Technologies |l Decoding the Human Brain |1 G:(DE-HGF)POF3-570 |0 G:(DE-HGF)POF3-574 |2 G:(DE-HGF)POF3-500 |v Theory, modelling and simulation |x 1 |4 G:(DE-HGF)POF |3 G:(DE-HGF)POF3 |
| 914 | 1 | _ | |y 2016 |
| 915 | _ | _ | |a Nationallizenz |0 StatID:(DE-HGF)0420 |2 StatID |
| 915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0200 |2 StatID |b SCOPUS |
| 920 | _ | _ | |l yes |
| 920 | 1 | _ | |0 I:(DE-Juel1)JSC-20090406 |k JSC |l Jülich Supercomputing Center |x 0 |
| 920 | 1 | _ | |0 I:(DE-Juel1)INM-1-20090406 |k INM-1 |l Strukturelle und funktionelle Organisation des Gehirns |x 1 |
| 980 | _ | _ | |a contrib |
| 980 | _ | _ | |a VDB |
| 980 | _ | _ | |a contb |
| 980 | _ | _ | |a I:(DE-Juel1)JSC-20090406 |
| 980 | _ | _ | |a I:(DE-Juel1)INM-1-20090406 |
| 980 | _ | _ | |a UNRESTRICTED |
| 981 | _ | _ | |a I:(DE-Juel1)INM-1-20090406 |
| Library | Collection | CLSMajor | CLSMinor | Language | Author |
|---|
Gast ::