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@ARTICLE{Postma:834661,
      author       = {Postma, Johannes Auke and Kuppe, Christian and Owen, Markus
                      R. and Mellor, Nathan and Griffiths, Marcus and Bennett,
                      Malcolm J. and Lynch, Jonathan P. and Watt, Michelle},
      title        = {{O}pen{S}im{R}oot: {W}idening the scope and application of
                      root architectural models},
      journal      = {The new phytologist},
      volume       = {215},
      number       = {3},
      issn         = {0028-646X},
      address      = {Oxford [u.a.]},
      publisher    = {Wiley-Blackwell},
      reportid     = {FZJ-2017-04565},
      pages        = {-},
      year         = {2017},
      abstract     = {Research Conducted and Rationale: OpenSimRoot is an open
                      sourced, functional-structural plant model and mathematical
                      description of root growth and function. We describe
                      OpenSimRoot and its functionality to broaden the benefits of
                      root modeling to the plant science community.Description:
                      OpenSimRoot is an extended version of SimRoot, established
                      to simulate root system architecture, nutrient acquisition,
                      and plant growth. OpenSimRoot has a plugin, modular
                      infrastructure, coupling single plant and crop stands to
                      soil nutrient, and water transport models. It estimates the
                      value of root traits for water and nutrient acquisition in
                      environments and plant species.Key results and unique
                      features: The flexible OpenSimRoot design allows upscaling
                      from root anatomy to plant community to estimate 1) resource
                      costs of developmental and anatomical traits, 2) trait
                      synergisms, 3) (inter species) root competition. OpenSimRoot
                      can model 3D images from MRI and X-ray CT of roots in soil.
                      New modules include: 1) soil water dependent water uptake
                      and xylem flow, 2) tiller formation, 3) evapotranspiration,
                      4) simultaneous simulation of mobile solutes, 5) mesh
                      refinement, and 6) root growth plasticity. Conclusion:
                      OpenSimRoot integrates plant phenotypic data with
                      environmental metadata to support experimental designs and
                      gain mechanistic understanding at system scales. Keywords:
                      Root system architecture, Functional Structural Plant Model,
                      OpenSimRoot, Root architectural traits, Simulation, Model
                      driven Phenotyping, Plant nutrition},
      cin          = {IBG-2},
      ddc          = {580},
      cid          = {I:(DE-Juel1)IBG-2-20101118},
      pnm          = {582 - Plant Science (POF3-582)},
      pid          = {G:(DE-HGF)POF3-582},
      typ          = {PUB:(DE-HGF)16},
      UT           = {WOS:000405197500031},
      pubmed       = {pmid:28653341},
      doi          = {10.1111/nph.14641},
      url          = {https://juser.fz-juelich.de/record/834661},
}