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100 1 _ |a Atkinson, Sarah C.
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245 _ _ |a Substrate Locking Promotes Dimer-Dimer Docking of an Enzyme Antibiotic Target
260 _ _ |a Cambridge, Mass.
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520 _ _ |a Protein dynamics manifested through structural flex-ibility play a central role in the function of biologicalmolecules. Here we explore the substrate-mediatedchange in protein flexibility of an antibiotic targetenzyme, Clostridium botulinum dihydrodipicolinatesynthase. We demonstrate that the substrate, pyru-vate, stabilizes the more active dimer-of-dimers ortetrameric form. Surprisingly, there is little differencebetween the crystal structures of apo and substrate-bound enzyme, suggesting protein dynamics may beimportant. Neutron and small-angle X-ray scatteringexperiments were used to probe substrate-induceddynamics on the sub-second timescale, but nosignificant changes were observed. We thereforedeveloped a simple technique, coined protein dy-namics-mass spectrometry (ProD-MS), which en-ables measurement of time-dependent alkylation ofcysteine residues. ProD-MS together with X-raycrystallography and analytical ultracentrifugationanalyses indicates that pyruvate locks the conforma-tion of the dimer that promotes docking to the moreactive tetrameric form, offering insight into ligand-mediated stabilization of multimeric enzymes.
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693 _ _ |a Forschungs-Neutronenquelle Heinz Maier-Leibnitz
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700 1 _ |a Dogovski, Con
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700 1 _ |a Wood, Kathleen
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700 1 _ |a Griffin, Michael D. W.
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700 1 _ |a Gorman, Michael A.
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700 1 _ |a Hor, Lilian
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700 1 _ |a Reboul, Cyril F.
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700 1 _ |a Buckle, Ashley M.
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700 1 _ |a Wuttke, Joachim
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700 1 _ |a Parker, Michael W.
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700 1 _ |a Dobson, Renwick C. J.
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700 1 _ |a Perugini, Matthew A.
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773 _ _ |a 10.1016/j.str.2018.04.014
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