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001     859933
005     20210315110836.0
020 _ _ |a 978-3-030-02464-2 (print)
020 _ _ |a 978-3-030-02465-9 (electronic)
024 7 _ |a 10.1007/978-3-030-02465-9_18
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024 7 _ |a 0302-9743
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024 7 _ |a 1611-3349
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024 7 _ |a 2128/21393
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024 7 _ |a WOS:000612998200022
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037 _ _ |a FZJ-2019-00745
100 1 _ |a Oehrl, Simon
|0 0000-0001-6504-2293
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|e Corresponding author
111 2 _ |a ISC High Performance 2018
|c Frankfurt
|d 2018-06-24 - 2018-06-28
|w Germany
245 _ _ |a Streaming Live Neuronal Simulation Data into Visualization and Analysis
260 _ _ |a Cham
|c 2018
|b Springer International Publishing
295 1 0 |a High Performance Computing / Yokota, Rio (Editor) [0000-0001-7573-7873] ; Cham : Springer International Publishing, 2018, Chapter 18 ; ISSN: 0302-9743=1611-3349 ; ISBN: 978-3-030-02464-2=978-3-030-02465-9 ; doi:10.1007/978-3-030-02465-9
300 _ _ |a 258 - 272
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490 0 _ |a Lecture Notes in Computer Science
|v 11203
500 _ _ |a Article attached has a 12 month embargo (until 25.1.2020): https://www.springer.com/de/open-access/authors-rights/self-archiving-policy/2124
520 _ _ |a Neuroscientists want to inspect the data their simulations are producing while these are still running. This will on the one hand save them time waiting for results and therefore insight. On the other, it will allow for more efficient use of CPU time if the simulations are being run on supercomputers. If they had access to the data being generated, neuroscientists could monitor it and take counter-actions, e.g., parameter adjustments, should the simulation deviate too much from in-vivo observations or get stuck.As a first step toward this goal, we devise an in situ pipeline tailored to the neuroscientific use case. It is capable of recording and transferring simulation data to an analysis/visualization process, while the simulation is still running. The developed libraries are made publicly available as open source projects. We provide a proof-of-concept integration, coupling the neuronal simulator NEST to basic 2D and 3D visualization.KeywordsNeuroscientific simulation In situ visualization
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536 _ _ |a HBP SGA2 - Human Brain Project Specific Grant Agreement 2 (785907)
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700 1 _ |a Müller, Jan
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700 1 _ |a Schnathmeier, Jan
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700 1 _ |a Eppler, Jochen Martin
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700 1 _ |a Peyser, Alexander
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700 1 _ |a Plesser, Hans Ekkehard
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700 1 _ |a Weyers, Benjamin
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700 1 _ |a Hentschel, Bernd
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700 1 _ |a Kuhlen, Torsten
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700 1 _ |a Vierjahn, Tom
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770 _ _ |z 978-3-030-02465-9
773 _ _ |a 10.1007/978-3-030-02465-9_18
856 4 _ |u https://juser.fz-juelich.de/record/859933/files/paper_13.pdf
|y Published on 2019-01-25. Available in OpenAccess from 2020-01-25.
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|y Published on 2019-01-25. Available in OpenAccess from 2020-01-25.
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