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@ARTICLE{Schneider:860960,
      author       = {Schneider, Trang and Bolger, Anthony and Zeier, Jürgen and
                      Preiskowski, Sabine and Benes, Vladimir and Trenkamp, Sandra
                      and Usadel, Björn and Farre, Eva M. and Matsubara, Shizue},
      title        = {{F}luctuating {L}ight {I}nteracts with {T}ime of {D}ay and
                      {L}eaf {D}evelopment {S}tage to {R}eprogram {G}ene
                      {E}xpression},
      journal      = {Plant physiology},
      volume       = {179},
      issn         = {1532-2548},
      address      = {Rockville, Md.},
      publisher    = {Soc.},
      reportid     = {FZJ-2019-01601},
      pages        = {1632-1657},
      year         = {2019},
      abstract     = {Natural-light environments are highly variable. Flexible
                      adjustment between light energy utilization and
                      photoprotection is therefore of vital importance for plant
                      performance and fitness in the field. Short-term reactions
                      to changing light intensity are triggered inside
                      chloroplasts and leaves within seconds to minutes, whereas
                      long-term adjustments proceed over hours and days,
                      integrating multiple signals. While the mechanisms of
                      long-term acclimation to light intensity have been studied
                      by changing constant growth light intensity during the day,
                      responses to fluctuating growth light intensity have rarely
                      been inspected in detail. We performed transcriptome
                      profiling in Arabidopsis (Arabidopsis thaliana) leaves to
                      investigate long-term gene expression responses to
                      fluctuating light (FL). In particular, we examined whether
                      responses differ between young and mature leaves or between
                      morning and at the end of the day. Our results highlight
                      global reprogramming of gene expression under FL, including
                      that of genes related to photoprotection, photosynthesis and
                      photorespiration and to pigment, prenylquinone and vitamin
                      metabolism. The FL-induced changes in gene expression varied
                      between young and mature leaves at the same time point, and
                      between the same leaves in the morning and at the end of the
                      day, indicating interactions of FL acclimation with leaf
                      development stage and time of day. Only 46 genes were up- or
                      downregulated in both young and mature leaves at both time
                      points. Combined analyses of gene co-expression and
                      cis-elements pointed to a role of the circadian clock and
                      light in coordinating the acclimatory responses of
                      functionally related genes. Our results also suggest a
                      possible crosstalk between FL acclimation and systemic
                      acquired resistance-like gene expression in young leaves.},
      cin          = {IBG-2},
      ddc          = {580},
      cid          = {I:(DE-Juel1)IBG-2-20101118},
      pnm          = {582 - Plant Science (POF3-582)},
      pid          = {G:(DE-HGF)POF3-582},
      typ          = {PUB:(DE-HGF)16},
      pubmed       = {pmid:30718349},
      UT           = {WOS:000462993100039},
      doi          = {10.1104/pp.18.01443},
      url          = {https://juser.fz-juelich.de/record/860960},
}