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@ARTICLE{Sarter:866680,
author = {Sarter, Mona and Niether, Doreen and König, Bernd and
Lohstroh, Wiebke and Zamponi, Michaela and Jalarvo, Niina H.
and Wiegand, Simone and Fitter, Jörg and Stadler, Andreas
M.},
title = {{S}trong {A}dverse {C}ontribution of {C}onformational
{D}ynamics to {S}treptavidin-{B}iotin {B}inding},
journal = {The journal of physical chemistry / B},
volume = {124},
number = {2},
issn = {1089-5647},
address = {Washington, DC},
publisher = {Soc.},
reportid = {FZJ-2019-05758},
pages = {324-335},
year = {2020},
abstract = {Molecular dynamics plays an important role for the
biological function of proteins. For protein ligand
interactions, changes of conformational entropy of protein
and hydration layer are relevant for the binding process.
Quasielastic neutron scattering (QENS) was used to
investigate differences in protein dynamics and
conformational entropy of ligand-bound and ligand-free
streptavidin. Protein dynamics were probed both on the fast
picosecond time scale using neutron time-of-flight
spectroscopy and on the slower nanosecond time scale using
high-resolution neutron backscattering spectroscopy. We
found the internal equilibrium motions of streptavidin and
the corresponding mean square displacements (MSDs) to be
greatly reduced upon biotin binding. On the basis of the
observed MSDs, we calculated the difference of
conformational entropy ΔSconf of the protein component
between ligand-bound and ligand-free streptavidin. The
rather large negative ΔSconf value (−2 kJ mol–1 K–1
on the nanosecond time scale) obtained for the streptavidin
tetramer seems to be counterintuitive, given the
exceptionally high affinity of streptavidin–biotin
binding. Literature data on the total entropy change ΔS
observed upon biotin binding to streptavidin, which includes
contributions from both the protein and the hydration water,
suggest partial compensation of the unfavorable ΔSconf by a
large positive entropy gain of the surrounding hydration
layer and water molecules that are displaced during ligand
binding.},
cin = {ICS-5 / ICS-3 / ICS-6 / JCNS-1 / JCNS-SNS / ICS-1 /
JCNS-FRM-II},
ddc = {530},
cid = {I:(DE-Juel1)ICS-5-20110106 / I:(DE-Juel1)ICS-3-20110106 /
I:(DE-Juel1)ICS-6-20110106 / I:(DE-Juel1)JCNS-1-20110106 /
I:(DE-Juel1)JCNS-SNS-20110128 / I:(DE-Juel1)ICS-1-20110106 /
I:(DE-Juel1)JCNS-FRM-II-20110218},
pnm = {551 - Functional Macromolecules and Complexes (POF3-551)},
pid = {G:(DE-HGF)POF3-551},
experiment = {EXP:(DE-MLZ)SPHERES-20140101 /
EXP:(DE-MLZ)TOF-TOF-20140101},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:31710813},
UT = {WOS:000508468600003},
doi = {10.1021/acs.jpcb.9b08467},
url = {https://juser.fz-juelich.de/record/866680},
}