000889712 001__ 889712 000889712 005__ 20210127115349.0 000889712 020__ $$a1877-1173 000889712 0247_ $$2Handle$$a2128/26802 000889712 037__ $$aFZJ-2021-00334 000889712 041__ $$aEnglish 000889712 1001_ $$0P:(DE-Juel1)174397$$aLoschwitz, Jennifer$$b0$$ufzj 000889712 245__ $$aComputer simulations of protein–membrane systems 000889712 260__ $$aAmsterdam [u.a.]$$bElsevier$$c2020 000889712 29510 $$aProgress in Molecular Biology and Translational Science 000889712 300__ $$a273-403 000889712 3367_ $$2ORCID$$aBOOK_CHAPTER 000889712 3367_ $$07$$2EndNote$$aBook Section 000889712 3367_ $$2DRIVER$$abookPart 000889712 3367_ $$2BibTeX$$aINBOOK 000889712 3367_ $$2DataCite$$aOutput Types/Book chapter 000889712 3367_ $$0PUB:(DE-HGF)7$$2PUB:(DE-HGF)$$aContribution to a book$$bcontb$$mcontb$$s1610979796_13821 000889712 520__ $$aThe interactions between proteins and membranes play critical roles in signal transduction, cell motility, and transport, and they are involved in many types of diseases. Molecular dynamics (MD) simulations have greatly contributed to our understanding of protein–membrane interactions, promoted by a dramatic development of MD-related software, increasingly accurate force fields, and available computer power. In this chapter, we present available methods for studying protein–membrane systems with MD simulations, including an overview about the various all-atom and coarse-grained force fields for lipids, and useful software for membrane simulation setup and analysis. A large set of case studies is discussed. 000889712 536__ $$0G:(DE-HGF)POF3-553$$a553 - Physical Basis of Diseases (POF3-553)$$cPOF3-553$$fPOF III$$x0 000889712 7001_ $$0P:(DE-Juel1)180244$$aOlubiyi, Olujide$$b1$$ufzj 000889712 7001_ $$0P:(DE-HGF)0$$aHub, Jochen S.$$b2 000889712 7001_ $$0P:(DE-Juel1)132024$$aStrodel, Birgit$$b3$$ufzj 000889712 7001_ $$0P:(DE-Juel1)140589$$aPoojari, Chetan$$b4$$eCorresponding author 000889712 8564_ $$uhttps://juser.fz-juelich.de/record/889712/files/%20Progress%20in%20Molecular%20Biology%20and%20Translational%20Science-%20Computer%20simulations%20of%20protein%E2%80%93membrane%20systems.pdf$$yRestricted$$zStatID:(DE-HGF)0599 000889712 8564_ $$uhttps://juser.fz-juelich.de/record/889712/files/Computer%20simulations%20of%20protein%E2%80%93membrane%20systems.pdf$$yOpenAccess$$zStatID:(DE-HGF)0510 000889712 909CO $$ooai:juser.fz-juelich.de:889712$$pdnbdelivery$$pdriver$$pVDB$$popen_access$$popenaire 000889712 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)174397$$aForschungszentrum Jülich$$b0$$kFZJ 000889712 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)180244$$aForschungszentrum Jülich$$b1$$kFZJ 000889712 9101_ $$0I:(DE-588b)5008462-8$$6P:(DE-Juel1)132024$$aForschungszentrum Jülich$$b3$$kFZJ 000889712 9131_ $$0G:(DE-HGF)POF3-553$$1G:(DE-HGF)POF3-550$$2G:(DE-HGF)POF3-500$$3G:(DE-HGF)POF3$$4G:(DE-HGF)POF$$aDE-HGF$$bKey Technologies$$lBioSoft – Fundamentals for future Technologies in the fields of Soft Matter and Life Sciences$$vPhysical Basis of Diseases$$x0 000889712 9141_ $$y2020 000889712 915__ $$0StatID:(DE-HGF)0510$$2StatID$$aOpenAccess 000889712 920__ $$lyes 000889712 9201_ $$0I:(DE-Juel1)IBI-7-20200312$$kIBI-7$$lStrukturbiochemie$$x0 000889712 980__ $$acontb 000889712 980__ $$aVDB 000889712 980__ $$aUNRESTRICTED 000889712 980__ $$aI:(DE-Juel1)IBI-7-20200312 000889712 9801_ $$aFullTexts