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037 _ _ |a FZJ-2021-01458
041 _ _ |a English
100 1 _ |a Tan, Zihan
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111 2 _ |a APS March Meeting 2021
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|d 2021-03-15 - 2021-03-19
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245 _ _ |a Quasi-two-dimensional diffusion of interacting globular proteins
260 _ _ |c 2021
336 7 _ |a Conference Paper
|0 33
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336 7 _ |a Other
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500 _ _ |a *Computing time is granted through JARA-HPC on JURECA at the Forschungszentrum Jülich.
520 _ _ |a Diffusion of proteins along lipid membranes plays a vital role in cell signaling processes. How the collective and self-diffusion of proteins are affected by direct and hydrodynamic interactions is relevant, e.g., for protein clustering and oligomerization of receptor protein subunits. Using mesoscale hydrodynamic simulations, the dynamic predictions by a minimalistic protein-membrane-cytosol model are explored. The model describes globular proteins as Brownian spheres, confined to lateral motion in a planar monolayer embedded in a three-dimensional viscous fluid. The proteins are assumed to interact pairwisely either via a hard-core potential or a soft potential consisting of competing short-range attractive and long-range repulsive parts. We analyze spatio-temporal correlations from short times where inertial motion is resolved up to long times where the solvent-mediated hydrodynamic interactions between proteins are fully developed. In this context, we investigate the short-time buildup of inter-protein hydrodynamic interactions by multiple scattering of sound and vorticity diffusion, and long-time anomalous enhancement of collective diffusion, in their dependence on protein concentration.
536 _ _ |a 524 - Molecular and Cellular Information Processing (POF4-524)
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700 1 _ |a Dhont, Jan K.G.
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700 1 _ |a Calandrini, Vania
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700 1 _ |a Naegele, Gerhard
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856 4 _ |u https://meetings.aps.org/Meeting/MAR21/Session/C16.2
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914 1 _ |y 2021
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Marc 21