001     8935
005     20180208212802.0
024 7 _ |a pmid:19356242
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024 7 _ |a pmc:PMC2696411
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024 7 _ |a 10.1186/1757-5036-2-2
|2 DOI
037 _ _ |a PreJuSER-8935
041 _ _ |a eng
082 _ _ |a 570
100 1 _ |a Irbäck, A.
|b 0
|0 P:(DE-HGF)0
245 _ _ |a An effective all-­atom potential for proteins
260 _ _ |a Berlin
|b Springer
|c 2009
300 _ _ |a 2
336 7 _ |a Journal Article
|0 PUB:(DE-HGF)16
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336 7 _ |a Output Types/Journal article
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336 7 _ |a Journal Article
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336 7 _ |a ARTICLE
|2 BibTeX
336 7 _ |a JOURNAL_ARTICLE
|2 ORCID
336 7 _ |a article
|2 DRIVER
440 _ 0 |a PMC Biophysics
|x 1757-5036
|0 22082
|v 2
500 _ _ |a Record converted from VDB: 12.11.2012
520 _ _ |a We describe and test an implicit solvent all-atom potential for simulations of protein folding and aggregation. The potential is developed through studies of structural and thermodynamic properties of 17 peptides with diverse secondary structure. Results obtained using the final form of the potential are presented for all these peptides. The same model, with unchanged parameters, is furthermore applied to a heterodimeric coiled-coil system, a mixed alpha/beta protein and a three-helix-bundle protein, with very good results. The computational efficiency of the potential makes it possible to investigate the free-energy landscape of these 49-67-residue systems with high statistical accuracy, using only modest computational resources by today's standards.PACS Codes: 87.14.E-, 87.15.A-, 87.15.Cc.
536 _ _ |a Scientific Computing
|c P41
|2 G:(DE-HGF)
|0 G:(DE-Juel1)FUEK411
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588 _ _ |a Dataset connected to Pubmed
700 1 _ |a Mitternacht, S.
|b 1
|0 P:(DE-HGF)0
700 1 _ |a Mohanty, S.
|b 2
|u FZJ
|0 P:(DE-Juel1)132590
773 _ _ |g Vol. 2, p. 2
|p 2
|q 2<2
|0 PERI:(DE-600)2466652-X
|t PMC Biophysics
|v 2
|y 2009
|x 1757-5036
|a 10.1186/1757-5036-2-2
856 4 _ |u http://www.biomedcentral.com/2046-1682/2/2
856 7 _ |2 Pubmed Central
|u http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2696411
909 C O |o oai:juser.fz-juelich.de:8935
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913 1 _ |k P41
|v Scientific Computing
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914 1 _ |a Nachtrag
|y 2009
915 _ _ |0 StatID:(DE-HGF)0010
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915 _ _ |0 StatID:(DE-HGF)0030
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920 1 _ |k JSC
|l Jülich Supercomputing Centre
|g JSC
|0 I:(DE-Juel1)JSC-20090406
|x 0
970 _ _ |a VDB:(DE-Juel1)118264
980 _ _ |a VDB
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980 _ _ |a journal
980 _ _ |a I:(DE-Juel1)JSC-20090406
980 _ _ |a UNRESTRICTED


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