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@ARTICLE{Paquola:897099,
author = {Paquola, Casey and Royer, Jessica and Lewis, Lindsay B and
Lepage, Claude and Glatard, Tristan and Wagstyl, Konrad and
DeKraker, Jordan and Toussaint, Paule-J and Valk, Sofie L
and Collins, Louis and Khan, Ali R and Amunts, Katrin and
Evans, Alan C and Dickscheid, Timo and Bernhardt, Boris},
title = {{T}he {B}ig{B}rain{W}arp toolbox for integration of
{B}ig{B}rain 3{D} histology with multimodal neuroimaging},
journal = {eLife},
volume = {10},
issn = {2050-084X},
address = {Cambridge},
publisher = {eLife Sciences Publications},
reportid = {FZJ-2021-03598},
pages = {e70119},
year = {2021},
abstract = {Neuroimaging stands to benefit from emerging
ultrahigh-resolution 3D histological atlases of the human
brain; the first of which is ‘BigBrain’. Here, we review
recent methodological advances for the integration of
BigBrain with multi-modal neuroimaging and introduce a
toolbox, ’BigBrainWarp’, that combines these
developments. The aim of BigBrainWarp is to simplify
workflows and support the adoption of best practices. This
is accomplished with a simple wrapper function that allows
users to easily map data between BigBrain and standard MRI
spaces. The function automatically pulls specialised
transformation procedures, based on ongoing research from a
wide collaborative network of researchers. Additionally, the
toolbox improves accessibility of histological information
through dissemination of ready-to-use cytoarchitectural
features. Finally, we demonstrate the utility of
BigBrainWarp with three tutorials and discuss the potential
of the toolbox to support multi-scale investigations of
brain organisation.},
cin = {INM-1},
ddc = {600},
cid = {I:(DE-Juel1)INM-1-20090406},
pnm = {5254 - Neuroscientific Data Analytics and AI (POF4-525) /
HIBALL - Helmholtz International BigBrain Analytics and
Learning Laboratory (HIBALL) (InterLabs-0015)},
pid = {G:(DE-HGF)POF4-5254 / G:(DE-HGF)InterLabs-0015},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:34431476},
UT = {WOS:000697792200001},
doi = {10.7554/eLife.70119},
url = {https://juser.fz-juelich.de/record/897099},
}