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@ARTICLE{Becker:902382,
author = {Becker, J. and Böhme, P. and Reckert, A. and Eickhoff, S.
B. and Koop, B. E. and Blum, J. and Gündüz, T. and
Takayama, M. and Wagner, W. and Ritz-Timme, S.},
title = {{E}vidence for differences in {DNA} methylation between
{G}ermans and {J}apanese},
journal = {International journal of legal medicine},
volume = {136},
issn = {1437-1596},
address = {Heidelberg},
publisher = {Springer},
reportid = {FZJ-2021-04216},
pages = {405–413},
year = {2022},
abstract = {As a contribution to the discussion about the possible
effects of ethnicity/ancestry on age estimation based on DNA
methylation (DNAm) patterns, we directly compared
age-associated DNAm in German and Japanese donors in one
laboratory under identical conditions. DNAm was analyzed by
pyrosequencing for 22 CpG sites (CpGs) in the genes PDE4C,
RPA2, ELOVL2, DDO, and EDARADD in buccal mucosa samples from
German and Japanese donors (N = 368 and N = 89,
respectively).Twenty of these CpGs revealed a very high
correlation with age and were subsequently tested for
differences between German and Japanese donors aged between
10 and 65 years (N = 287 and N = 83, respectively). ANCOVA
was performed by testing the Japanese samples against age-
and sex-matched German subsamples (N = 83 each; extracted
500 times from the German total sample). The median p values
suggest a strong evidence for significant differences (p <
0.05) at least for two CpGs (EDARADD, CpG 2, and PDE4C, CpG
2) and no differences for 11 CpGs (p > 0.3).Age prediction
models based on DNAm data from all 20 CpGs from German
training data did not reveal relevant differences between
the Japanese test samples and German subsamples. Obviously,
the high number of included "robust CpGs" prevented relevant
effects of differences in DNAm at two CpGs.Nevertheless, the
presented data demonstrates the need for further research
regarding the impact of confounding factors on DNAm in the
context of ethnicity/ancestry to ensure a high quality of
age estimation. One approach may be the search for "robust"
CpG markers-which requires the targeted investigation of
different populations, at best by collaborative research
with coordinated research strategies.},
cin = {INM-7},
ddc = {610},
cid = {I:(DE-Juel1)INM-7-20090406},
pnm = {5252 - Brain Dysfunction and Plasticity (POF4-525)},
pid = {G:(DE-HGF)POF4-5252},
typ = {PUB:(DE-HGF)16},
pubmed = {pmid:34739581},
UT = {WOS:000714849400001},
doi = {10.1007/s00414-021-02736-3},
url = {https://juser.fz-juelich.de/record/902382},
}