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@ARTICLE{Wibberg:904491,
      author       = {Wibberg, Daniel and Genzel, Franziska and Verwaaijen, Bart
                      and Blom, Jochen and Rupp, Oliver and Goesmann, Alexander
                      and Zrenner, Rita and Grosch, Rita and Pühler, Alfred and
                      Schlüter, Andreas},
      title        = {{G}enome {A}nalyses of the {L}ess {A}ggressive
                      {R}hizoctonia solani {AG}1-{IB} {I}solates 1/2/21 and {O}8/2
                      {C}ompared to the {R}eference {AG}1-{IB} {I}solate 7/3/14},
      journal      = {Journal of Fungi},
      volume       = {7},
      number       = {10},
      issn         = {2309-608X},
      address      = {Basel},
      publisher    = {MDPI},
      reportid     = {FZJ-2021-06061},
      pages        = {832 -},
      year         = {2021},
      abstract     = {Rhizoctonia solani AG1-IB of the phylum Basidiomycota is
                      known as phytopathogenic fungus affecting various
                      economically important crops, such as bean, rice, soybean,
                      figs, cabbage and lettuce. The isolates 1/2/21 and O8/2 of
                      the anastomosis group AG1-IB originating from lettuce plants
                      with bottom rot symptoms represent two less aggressive R.
                      solani isolates, as confirmed in a pathogenicity test on
                      lettuce. They were deeply sequenced on the Illumina MiSeq
                      system applying the mate-pair and paired-end mode to
                      establish their genome sequences. Assemblies of obtained
                      sequences resulted in 2092 and 1492 scaffolds, respectively,
                      for isolate 1/2/21 and O8/2, amounting to a size of
                      approximately 43 Mb for each isolate. Gene prediction by
                      applying AUGUSTUS (v. 3.2.1.) yielded 12,827 and 12,973
                      identified genes, respectively. Based on automatic
                      functional annotation, genes potentially encoding cellulases
                      and enzymes involved in secondary metabolite synthesis were
                      identified in the AG1-IB genomes. The annotated genome
                      sequences of the less aggressive AG1-IB isolates were
                      compared with the isolate 7/3/14, which is highly aggressive
                      on lettuce and other vegetable crops such as bean, cabbage
                      and carrot. This analysis revealed the first insights into
                      core genes of AG1-IB isolates and unique determinants of
                      each genome that may explain the different aggressiveness
                      levels of the strains},
      cin          = {IBG-4 / IBG-2},
      ddc          = {570},
      cid          = {I:(DE-Juel1)IBG-4-20200403 / I:(DE-Juel1)IBG-2-20101118},
      pnm          = {2171 - Biological and environmental resources for
                      sustainable use (POF4-217)},
      pid          = {G:(DE-HGF)POF4-2171},
      typ          = {PUB:(DE-HGF)16},
      pubmed       = {34682252},
      UT           = {WOS:000713512400001},
      doi          = {10.3390/jof7100832},
      url          = {https://juser.fz-juelich.de/record/904491},
}