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@ARTICLE{Zrenner:904499,
      author       = {Zrenner, Rita and Verwaaijen, Bart and Genzel, Franziska
                      and Flemer, Burkhardt and Grosch, Rita},
      title        = {{T}ranscriptional {C}hanges in {P}otato {S}prouts upon
                      {I}nteraction with {R}hizoctonia solani {I}ndicate
                      {P}athogen-{I}nduced {I}nterference in the {D}efence
                      {P}athways of {P}otato},
      journal      = {International journal of molecular sciences},
      volume       = {22},
      number       = {6},
      issn         = {1422-0067},
      address      = {Basel},
      publisher    = {Molecular Diversity Preservation International},
      reportid     = {FZJ-2021-06069},
      pages        = {3094 -},
      year         = {2021},
      abstract     = {Rhizoctonia solani is the causer of black scurf disease on
                      potatoes and is responsible for high economical losses in
                      global agriculture. In order to increase the limited
                      knowledge of the plants’ molecular response to this
                      pathogen, we inoculated potatoes with R. solani AG3-PT
                      isolate Ben3 and carried out RNA sequencing with total RNA
                      extracted from potato sprouts at three and eight days post
                      inoculation (dpi). In this dual RNA-sequencing experiment,
                      the necrotrophic lifestyle of R. solani AG3-PT during early
                      phases of interaction with its host has already been
                      characterised. Here the potato plants’ comprehensive
                      transcriptional response to inoculation with R. solani AG3
                      was evaluated for the first time based on significantly
                      different expressed plant genes extracted with DESeq
                      analysis. Overall, 1640 genes were differentially expressed,
                      comparing control (−Rs) and with R. solani AG3-PT isolate
                      Ben3 inoculated plants (+Rs). Genes involved in the
                      production of anti-fungal proteins and secondary metabolites
                      with antifungal properties were significantly up regulated
                      upon inoculation with R. solani. Gene ontology (GO) terms
                      involved in the regulation of hormone levels (i.e., ethylene
                      (ET) and jasmonic acid (JA) at 3 dpi and salicylic acid (SA)
                      and JA response pathways at 8 dpi) were significantly
                      enriched. Contrastingly, the GO term “response to abiotic
                      stimulus” was down regulated at both time points analysed.
                      These results may support future breeding efforts toward the
                      development of cultivars with higher resistance level to
                      black scurf disease or the development of new control
                      strategies.},
      cin          = {IBG-2},
      ddc          = {540},
      cid          = {I:(DE-Juel1)IBG-2-20101118},
      pnm          = {2171 - Biological and environmental resources for
                      sustainable use (POF4-217)},
      pid          = {G:(DE-HGF)POF4-2171},
      typ          = {PUB:(DE-HGF)16},
      pubmed       = {33803511},
      UT           = {WOS:000645694200001},
      doi          = {10.3390/ijms22063094},
      url          = {https://juser.fz-juelich.de/record/904499},
}