000905776 001__ 905776
000905776 005__ 20231123201913.0
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000905776 037__ $$aFZJ-2022-00999
000905776 1001_ $$0P:(DE-Juel1)187055$$aPaquola, Casey$$b0$$eCorresponding author
000905776 245__ $$aBigBrainWarp: Toolbox for integration of BigBrain 3D histology with mutlimodal neuroimaging
000905776 260__ $$c2021
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000905776 3367_ $$2BibTeX$$aARTICLE
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000905776 520__ $$aNeuroimaging stands to benefit from emerging ultrahigh-resolution histological atlases of the human brain; the first of which is "BigBrain". Ongoing research aims to characterise regional differentiation of cytoarchitecture with BigBrain and to optimise registration of BigBrain with standard neuroimaging templates. Together, this work paves the way for multi-scale investigations of brain organisation. However, working with BigBrain can present new challenges for neuroimagers, including dealing with cellular resolution neuroanatomy and complex transformation procedures. To simplify workflows and support adoption of best practices, we developed BigBrainWarp, a toolbox for integration of BigBrain with multimodal neuroimaging. The primary BigBrainWarp function wraps multiple state-of-the-art deformation matrices into one line of code, allowing users to easily map data between BigBrain and standard MRI spaces. Additionally, the toolbox contains ready-to-use cytoarchitectural features to improve accessibility of histological information. The present article discusses recent contributions to BigBrain-MRI integration and demonstrates the utility of BigBrainWarp for further investigations.
000905776 536__ $$0G:(DE-HGF)POF4-5251$$a5251 - Multilevel Brain Organization and Variability (POF4-525)$$cPOF4-525$$fPOF IV$$x0
000905776 536__ $$0G:(DE-HGF)InterLabs-0015$$aHIBALL - Helmholtz International BigBrain Analytics and Learning Laboratory (HIBALL) (InterLabs-0015)$$cInterLabs-0015$$x1
000905776 7001_ $$0P:(DE-HGF)0$$aRoyer, Jessica$$b1
000905776 7001_ $$0P:(DE-HGF)0$$aLewis, Lindsay B$$b2
000905776 7001_ $$0P:(DE-HGF)0$$aLepage, Claude$$b3
000905776 7001_ $$0P:(DE-HGF)0$$aGlatard, Tristan$$b4
000905776 7001_ $$0P:(DE-HGF)0$$aWagstyl, Konrad$$b5
000905776 7001_ $$0P:(DE-HGF)0$$aDeKraker, Jordan$$b6
000905776 7001_ $$0P:(DE-HGF)0$$aToussaint, Paule-J$$b7
000905776 7001_ $$0P:(DE-Juel1)173843$$aValk, Sofie Louise$$b8
000905776 7001_ $$0P:(DE-HGF)0$$aCollins, D Louis$$b9
000905776 7001_ $$0P:(DE-HGF)0$$aKhan, Ali$$b10
000905776 7001_ $$0P:(DE-Juel1)131631$$aAmunts, Katrin$$b11
000905776 7001_ $$0P:(DE-HGF)0$$aEvans, Alan C$$b12
000905776 7001_ $$0P:(DE-Juel1)165746$$aDickscheid, Timo$$b13
000905776 7001_ $$0P:(DE-HGF)0$$aBernhardt, Boris$$b14
000905776 8564_ $$uhttps://juser.fz-juelich.de/record/905776/files/2021.05.04.442563.full.pdf$$yOpenAccess
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000905776 9141_ $$y2022
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