Poster (After Call) FZJ-2023-03229

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Tracking large-scale simulations through unified metadata handling

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2022

Helmholtz Metadata Collaboration conference, VirtualVirtual, Germany, 5 Oct 2022 - 6 Oct 20222022-10-052022-10-06

Abstract: Simulation is an essential pillar of knowledge generation in science. The numerical models used to describe, predict, and understand real-world systems are typically complex. Consequently, applying these models by means of simulation often poses high demands on computational resources, and requires high-performance computing (HPC) or other dedicated hardware architectures. Metadata describing the details of a numerical experiment arise at all stages of the simulation process: the conceptual description of the model, the model implementation, and the tools and machines used to run the simulation. Capturing these metadata and provenance information along the processing chain is a vital requirement for several purposes, e.g. reproducibility, benchmarking and validation, assessment of the reliability of the simulations, and data exploration [1,2]. The ability to search, share, and evaluate metadata and provenance traces from heterogeneous simulations and environments is a major challenge in provenance-driven analysis. The availability of a common metadata framework, which can be adopted by scientists from different scientific domains, would foster the meta-analysis of HPC simulation workflows [3]. Here, we develop a metadata management framework for generic HPC-based simulation research comprising concepts and tools for efficiently generating, organizing, and exploring metadata along a given simulation workflow. The derived solutions cope with the modularity and flexibility demands of rapidly progressing science and are applicable to diverse research fields. As a proof of concept, we will apply these solutions to use cases from environmental research and computational neuroscience.[1] Guilyardi, E., et. al. (2013) doi: 10.1175/BAMS-D-11-00035.1[2] Manninen, T., et. al. (2018) doi: 10.3389/fninf.2018.00020[3] Ivie, P., & Thain, D. (2018). doi: 10.1145/3186266


Contributing Institute(s):
  1. Computational and Systems Neuroscience (INM-6)
  2. Theoretical Neuroscience (IAS-6)
  3. Jara-Institut Brain structure-function relationships (INM-10)
  4. Materials Data Science and Informatics (IAS-9)
Research Program(s):
  1. 5232 - Computational Principles (POF4-523) (POF4-523)
  2. MetaMoSim - Generic metadata management for reproducible high-performance-computing simulation workflows - MetaMoSim (ZT-I-PF-3-026) (ZT-I-PF-3-026)
  3. HBP SGA3 - Human Brain Project Specific Grant Agreement 3 (945539) (945539)
  4. ACA - Advanced Computing Architectures (SO-092) (SO-092)
  5. Brain-Scale Simulations (jinb33_20220812) (jinb33_20220812)

Appears in the scientific report 2023
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The record appears in these collections:
Institute Collections > INM > INM-10
Document types > Presentations > Poster
Institute Collections > IAS > IAS-9
Institute Collections > IAS > IAS-6
Institute Collections > INM > INM-6
Workflow collections > Public records
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 Record created 2023-08-29, last modified 2024-03-13



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