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001046723 1001_ $$0P:(DE-Juel1)191149$$aBeier, Sebastian$$b0
001046723 245__ $$aChromosome-level genome assemblies of Thai cassava ecotypes (Manihot esculenta & Manihot glaziovii)
001046723 260__ $$aLondon$$bNature Publ. Group$$c2025
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001046723 520__ $$aCassava is a vital staple crop, yet genomic resources for diverse ecotypes, particularly from key regions, remain limited. To address this, we generated high-quality genome assemblies for nine Thai M. esculenta cultivars and one wild relative, Manihot glaziovii. The sequencing strategy combined Oxford Nanopore long reads for initial assembly with Illumina short reads for polishing and quality assessment. For five of the genotypes, extensive RNA-Seq data from various tissues and developmental stages were also produced to guide gene annotation. We provide detailed technical validation of the ten genome assemblies, reporting on key metrics of contiguity (N50s from 28.9 to 35.2 Mb), completeness (Complete BUSCO scores from 95.69% to 99.21%), and base-level accuracy (k-mer QV scores from 33.47 to 37.67). The final annotated assemblies and all raw sequencing data have been deposited in public archives and are readily accessible. These datasets represent a significant expansion of the genomic toolkit for Asian cassava, providing a foundational resource for future genetic discovery, comparative genomics, and advanced breeding applications.
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001046723 536__ $$0G:(BMBF)031B0070$$aBioökonomie International 2015: CASSAVASTORe - Genetische und phänotypische Analysen zur Verbesserung der Speicherwurzelentwicklung von Maniok (031B0070)$$c031B0070$$x1
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001046723 65017 $$0V:(DE-MLZ)GC-2004-2016$$2V:(DE-HGF)$$aBasic research$$x0
001046723 7001_ $$0P:(DE-Juel1)162335$$aBolger, Marie Elizabeth$$b1
001046723 7001_ $$aChanvivattana, Yindee$$b2
001046723 7001_ $$aBolger, Anthony Michael$$b3
001046723 7001_ $$aSchmidt, Maximilian Heinrich-Wilhelm$$b4
001046723 7001_ $$aLeelapon, Oranuch$$b5
001046723 7001_ $$aRakmit, Rungroj$$b6
001046723 7001_ $$aChangmai, Kulnida$$b7
001046723 7001_ $$aRuayreun, Ratiporn$$b8
001046723 7001_ $$aSrithundon, Sukanya$$b9
001046723 7001_ $$aTotaiya, Duangjit$$b10
001046723 7001_ $$aSitchanukrit, Boriphat$$b11
001046723 7001_ $$0P:(DE-Juel1)145719$$aUsadel, Björn$$b12
001046723 7001_ $$aWongtiem, Prapit$$b13
001046723 7001_ $$aAmawan, Suwaluk$$b14
001046723 7001_ $$0P:(DE-Juel1)156560$$aWojciechowski, Tobias$$b15$$ufzj
001046723 773__ $$0PERI:(DE-600)2775191-0$$a10.1038/s41597-025-05998-3$$gVol. 12, no. 1, p. 1591$$n1$$p1591$$tScientific data$$v12$$x2052-4436$$y2025
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