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The Refined Structure of Functional Unit h of Keyhole Limpet Hemocyanin (KLH1-h) Reveals Disulfide Bridges

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2011

IUBMB Life 63, 183 - 187 () [10.1002/iub.435]

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Abstract: Hemocyanins are multimeric oxygen-transport proteins in the hemolymph of many arthropods and mollusks. The overall molecular architecture of arthropod and molluscan hemocyanin is very different, although they possess a similar binuclear type 3 copper center to bind oxygen in a side-on conformation. Gastropod hemocyanin is a 35 nm cylindrical didecamer (2 × 10-mer) based on a 400 kDa subunit. The latter is subdivided into eight paralogous "functional units" (FU-a to FU-h), each with an active site. FU-a to FU-f contribute to the cylinder wall, whereas FU-g and FU-h form the internal collar complex. Atomic structures of FU-e and FU-g, and a 9 Å cryoEM structure of the 8 MDa didecamer are available. Recently, the structure of keyhole limpet hemocyanin FU-h (KLH1-h) was presented as a C(α) -trace at 4 Å resolution. Unlike the other seven FU types, FU-h contains an additional C-terminal domain with a cupredoxin-like fold. Because of the resolution limit of 4 Å, in some loops, the course of the protein backbone could not be established with high certainty yet. Here, we present a refined atomic structure of FU-h (KLH1-h) obtained from low-resolution refinement, which unambiguously establishes the course of the polypeptide backbone and reveals the disulfide bridges as well as the orientation of bulky amino acids.

Keyword(s): Disulfides: chemistry (MeSH) ; Hemocyanin: chemistry (MeSH) ; Models, Molecular (MeSH) ; Disulfides ; keyhole-limpet hemocyanin ; Hemocyanin ; J ; hemocyanin (auto) ; copper protein (auto) ; cupredoxin (auto) ; type-3 copper (auto) ; mollusca (auto) ; low-resolution refinement (auto)


Note: Record converted from VDB: 12.11.2012

Contributing Institute(s):
  1. Strukturbiochemie (ICS-6)
Research Program(s):
  1. Funktion und Dysfunktion des Nervensystems (P33)
  2. BioSoft: Makromolekulare Systeme und biologische Informationsverarbeitung (P45)

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 Datensatz erzeugt am 2012-11-13, letzte Änderung am 2020-04-02



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