001 | 280660 | ||
005 | 20210129221359.0 | ||
024 | 7 | _ | |a 10.1093/bioinformatics/btu170 |2 doi |
024 | 7 | _ | |a 0266-7061 |2 ISSN |
024 | 7 | _ | |a 1367-4803 |2 ISSN |
024 | 7 | _ | |a 1367-4811 |2 ISSN |
024 | 7 | _ | |a 1460-2059 |2 ISSN |
024 | 7 | _ | |a 2128/9693 |2 Handle |
024 | 7 | _ | |a WOS:000340049100004 |2 WOS |
024 | 7 | _ | |a altmetric:2232301 |2 altmetric |
024 | 7 | _ | |a pmid:24695404 |2 pmid |
037 | _ | _ | |a FZJ-2016-00423 |
041 | _ | _ | |a English |
082 | _ | _ | |a 004 |
100 | 1 | _ | |a Bolger, A. M. |0 P:(DE-HGF)0 |b 0 |
245 | _ | _ | |a Trimmomatic: a flexible trimmer for Illumina sequence data |
260 | _ | _ | |a Oxford |c 2014 |b Oxford Univ. Press |
336 | 7 | _ | |a Journal Article |b journal |m journal |0 PUB:(DE-HGF)16 |s 1452850334_31358 |2 PUB:(DE-HGF) |
336 | 7 | _ | |a Output Types/Journal article |2 DataCite |
336 | 7 | _ | |a Journal Article |0 0 |2 EndNote |
336 | 7 | _ | |a ARTICLE |2 BibTeX |
336 | 7 | _ | |a JOURNAL_ARTICLE |2 ORCID |
336 | 7 | _ | |a article |2 DRIVER |
500 | _ | _ | |3 POF3_Assignment on 2016-02-29 |
520 | _ | _ | |a Motivation: Although many next-generation sequencing (NGS) read preprocessing tools already existed, we could not find any tool or combination of tools that met our requirements in terms of flexibility, correct handling of paired-end data and high performance. We have developed Trimmomatic as a more flexible and efficient preprocessing tool, which could correctly handle paired-end data.Results: The value of NGS read preprocessing is demonstrated for both reference-based and reference-free tasks. Trimmomatic is shown to produce output that is at least competitive with, and in many cases superior to, that produced by other tools, in all scenarios tested. |
536 | _ | _ | |a 582 - Plant Science (POF3-582) |0 G:(DE-HGF)POF3-582 |c POF3-582 |f POF III |x 0 |
588 | _ | _ | |a Dataset connected to CrossRef |
700 | 1 | _ | |a Lohse, M. |0 P:(DE-HGF)0 |b 1 |
700 | 1 | _ | |a Usadel, Björn |0 P:(DE-Juel1)145719 |b 2 |e Corresponding author |u fzj |
773 | _ | _ | |a 10.1093/bioinformatics/btu170 |g Vol. 30, no. 15, p. 2114 - 2120 |0 PERI:(DE-600)1468345-3 |n 15 |p 2114 - 2120 |t Bioinformatics |v 30 |y 2014 |x 1460-2059 |
856 | 4 | _ | |y OpenAccess |u https://juser.fz-juelich.de/record/280660/files/Bioinformatics-2014-Bolger-2114-20.pdf |
856 | 4 | _ | |y OpenAccess |x icon |u https://juser.fz-juelich.de/record/280660/files/Bioinformatics-2014-Bolger-2114-20.gif?subformat=icon |
856 | 4 | _ | |y OpenAccess |x icon-1440 |u https://juser.fz-juelich.de/record/280660/files/Bioinformatics-2014-Bolger-2114-20.jpg?subformat=icon-1440 |
856 | 4 | _ | |y OpenAccess |x icon-180 |u https://juser.fz-juelich.de/record/280660/files/Bioinformatics-2014-Bolger-2114-20.jpg?subformat=icon-180 |
856 | 4 | _ | |y OpenAccess |x icon-640 |u https://juser.fz-juelich.de/record/280660/files/Bioinformatics-2014-Bolger-2114-20.jpg?subformat=icon-640 |
856 | 4 | _ | |y OpenAccess |x pdfa |u https://juser.fz-juelich.de/record/280660/files/Bioinformatics-2014-Bolger-2114-20.pdf?subformat=pdfa |
909 | C | O | |o oai:juser.fz-juelich.de:280660 |p openaire |p open_access |p driver |p VDB |p dnbdelivery |
910 | 1 | _ | |a Forschungszentrum Jülich GmbH |0 I:(DE-588b)5008462-8 |k FZJ |b 2 |6 P:(DE-Juel1)145719 |
913 | 2 | _ | |a DE-HGF |b Key Technologies |l Key Technologies for the Bioeconomy |1 G:(DE-HGF)POF3-580 |0 G:(DE-HGF)POF3-589H |2 G:(DE-HGF)POF3-500 |v Addenda |x 0 |
913 | 1 | _ | |a DE-HGF |b Key Technologies |l Key Technologies for the Bioeconomy |1 G:(DE-HGF)POF3-580 |0 G:(DE-HGF)POF3-582 |2 G:(DE-HGF)POF3-500 |v Plant Science |x 0 |4 G:(DE-HGF)POF |3 G:(DE-HGF)POF3 |
914 | 1 | _ | |y 2015 |
915 | _ | _ | |a Creative Commons Attribution CC BY 3.0 |0 LIC:(DE-HGF)CCBY3 |2 HGFVOC |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0200 |2 StatID |b SCOPUS |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)1030 |2 StatID |b Current Contents - Life Sciences |
915 | _ | _ | |a OpenAccess |0 StatID:(DE-HGF)0510 |2 StatID |
915 | _ | _ | |a JCR |0 StatID:(DE-HGF)0100 |2 StatID |b BIOINFORMATICS : 2014 |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0150 |2 StatID |b Web of Science Core Collection |
915 | _ | _ | |a WoS |0 StatID:(DE-HGF)0110 |2 StatID |b Science Citation Index |
915 | _ | _ | |a WoS |0 StatID:(DE-HGF)0111 |2 StatID |b Science Citation Index Expanded |
915 | _ | _ | |a IF < 5 |0 StatID:(DE-HGF)9900 |2 StatID |
915 | _ | _ | |a Allianz-Lizenz / DFG |0 StatID:(DE-HGF)0400 |2 StatID |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0310 |2 StatID |b NCBI Molecular Biology Database |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)1050 |2 StatID |b BIOSIS Previews |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0300 |2 StatID |b Medline |
915 | _ | _ | |a Nationallizenz |0 StatID:(DE-HGF)0420 |2 StatID |
915 | _ | _ | |a DBCoverage |0 StatID:(DE-HGF)0199 |2 StatID |b Thomson Reuters Master Journal List |
920 | 1 | _ | |0 I:(DE-Juel1)IBG-2-20101118 |k IBG-2 |l Pflanzenwissenschaften |x 0 |
980 | _ | _ | |a journal |
980 | _ | _ | |a VDB |
980 | _ | _ | |a UNRESTRICTED |
980 | _ | _ | |a I:(DE-Juel1)IBG-2-20101118 |
980 | 1 | _ | |a UNRESTRICTED |
980 | 1 | _ | |a FullTexts |
Library | Collection | CLSMajor | CLSMinor | Language | Author |
---|