Poster (Other)

FZJ-2016-00692

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png phenoVein - A software tool for leaf vein segmentation and analysis

Bühler, J. (Corresponding author)FZJ* ; Rishmawi, L. ; Pflugfelder, D.FZJ* ; Huber, G.FZJ* ; Scharr, H.FZJ* ; Hülskamp, M. ; Koornneef, M. ; Schurr, U.FZJ* ; Jahnke, S.FZJ*

2015

Please use a persistent id in citations: http://hdl.handle.net/2128/15711

Abstract: phenoVein is a software tool dedicated to automated segmenting and analyzing images of leaf veins. It includes comfortable manual correction features. Advanced image filtering automatically emphasizes veins from background and compensates for local brightness inhomogeneities. Phenotypical leaf vein traits being calculated are total vein density, vein lengths and widths and skeleton graph statistics. For determination of vein widths, a model based vein edge estimation approach has been implemented. We demonstrate the capabilities of phenoVein on a set of vein structure mutants of Arabidopsis thaliana.

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Contributing Institute(s):

1. Pflanzenwissenschaften (IBG-2)

Research Program(s):

1. 582 - Plant Science (POF3-582) (POF3-582)
2. DPPN - Deutsches Pflanzen Phänotypisierungsnetzwerk (BMBF-031A053A) (BMBF-031A053A)
3. EPPN - European Plant Phenotyping Network (284443) (284443)

Appears in the scientific report 2015

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Database coverage:

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