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000826298 1001_ $$0P:(DE-Juel1)162335$$aBolger, Marie$$b0
000826298 245__ $$aPlant genome and transcriptome annotations: from misconceptions to simple solutions
000826298 260__ $$aOxford [u.a.]$$bOxford University Press$$c2017
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000826298 520__ $$aNext-generation sequencing has triggered an explosion of available genomic and transcriptomic resources in the plant sciences. Although genome and transcriptome sequencing has become orders of magnitudes cheaper and more efficient, often the functional annotation process is lagging behind. This might be hampered by the lack of a comprehensive enumeration of simple-to-use tools available to the plant researcher. In this comprehensive review, we present (i) typical ontologies to be used in the plant sciences, (ii) useful databases and resources used for functional annotation, (iii) what to expect from an annotated plant genome, (iv) an automated annotation pipeline and (v) a recipe and reference chart outlining typical steps used to annotate plant genomes/transcriptomes using publicly available resources.
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000826298 7001_ $$0P:(DE-Juel1)165155$$aArsova, Borjana$$b1
000826298 7001_ $$0P:(DE-Juel1)145719$$aUsadel, Björn$$b2$$eCorresponding author
000826298 773__ $$0PERI:(DE-600)2036055-1$$a10.1093/bib/bbw135$$gp. bbw135 -$$p1-13$$tBriefings in bioinformatics$$vbbw135$$x1477-4054$$y2017
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