Contribution to a book

FZJ-2018-00548

http://join2-wiki.gsi.de/foswiki/pub/Main/Artwork/join2_logo100x88.png UNICORE-based Neuroimaging and Data Sharing Workflow

Giesler, A. (Corresponding author)FZJ*

2017
KIT Scientific Publishing Karlsruhe
ISBN: 9783731506959

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Please use a persistent id in citations: http://hdl.handle.net/2128/16601  urn:nbn:de:0072-719313  doi:10.5445/KSP/1000071931

Abstract: We contributed to the realization of a complex image processing workflow for reconstructing the three-dimensional nerve fibers of postmortem brains by using the Polarized Light Imaging technique. Images of brain slices are processed with a chain of tools that have been integrated in a UNICORE-based workflow exploiting many of its features, such as automated processing, control structures, and data sharing. The introduction of the UNICORE workflow approach for this particular use case led to several benefits by enabling a time-saving automated processing, achieving better reproducibility, and performing routine data production for scientistswithout knowing the complex interaction of supercomputing and data infrastucture.

Note: Published in Open Access library of KIT

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Contributing Institute(s):

1. Jülich Supercomputing Center (JSC)

Research Program(s):

1. 512 - Data-Intensive Science and Federated Computing (POF3-512) (POF3-512)

Appears in the scientific report 2017

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Database coverage:

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