Poster (Other) FZJ-2025-02699

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Multi-scale Spiking Network Model of Human Cerebral Cortex

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2025

IAS Retreat 2025, JülichJülich, Germany, 27 May 2025 - 27 May 20252025-05-272025-05-27 [10.34734/FZJ-2025-02699]

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Abstract: Data-driven models at cellular resolution exist for various brain regions, yet few for human cortex. We present a comprehensive point-neuron network model of a human cortical hemisphere that integrates diverse experimental data into a unified framework bridging cellular and network scales [1]. Like a previous large-scale spiking model of macaque cortex [2,3], our work investigates how resting-state activity emerges in cortical networks.The model represents one hemisphere via the Desikan-Killiany parcellation (34 areas), with each area implemented as a 1 mm² microcircuit that distinguishes cortical layers. It aggregates multimodal data, including electron microscopy for synapse density, cytoarchitecture from the von Economo atlas [4], DTI-based connectivity [5], and local connection probabilities from the Potjans-Diesmann microcircuit [6]. Human neuron morphologies [7] guide layer-specific inter-area connectivity. The full-density model, comprising 3.47 million leaky integrate-and-fire neurons and 42.8 billion synapses, was simulated using NEST on the JURECA-DC supercomputer.Simulations show that equal strength for local and inter-area synapses yields asynchronous irregular activity that deviates from experimental observations. When inter-area connections are strengthened relative to local synapses, both microscopic spiking statistics from human medial frontal cortex and macroscopic resting-state fMRI correlations are reproduced [8]. In the latter scenario, consistent with empirical findings during visual imagery [9], sustained activity flows primarily from parietal through occipital and temporal to frontal areas.This open-source model enables systematic exploration of structure-dynamics relationships. Future work may leverage the Julich-Brain Atlas to refine the parcellation and incorporate detailed cytoarchitectural and receptor data [10]. The model code is available at https://github.com/INM-6/human-multi-area-model.


Contributing Institute(s):
  1. Computational and Systems Neuroscience (IAS-6)
Research Program(s):
  1. 5231 - Neuroscientific Foundations (POF4-523) (POF4-523)
  2. HBP SGA3 - Human Brain Project Specific Grant Agreement 3 (945539) (945539)
  3. EBRAINS 2.0 - EBRAINS 2.0: A Research Infrastructure to Advance Neuroscience and Brain Health (101147319) (101147319)
  4. JL SMHB - Joint Lab Supercomputing and Modeling for the Human Brain (JL SMHB-2021-2027) (JL SMHB-2021-2027)
  5. HiRSE_PS - Helmholtz Platform for Research Software Engineering - Preparatory Study (HiRSE_PS-20220812) (HiRSE_PS-20220812)
  6. Brain-Scale Simulations (jinb33_20220812) (jinb33_20220812)
  7. DFG project G:(GEPRIS)491111487 - Open-Access-Publikationskosten / 2025 - 2027 / Forschungszentrum Jülich (OAPKFZJ) (491111487) (491111487)

Appears in the scientific report 2025
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 Record created 2025-05-29, last modified 2025-06-27


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